RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MRE11P49959 708 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 FAM193AP78312 1265 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 SLC6A3Q01959 620 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 DUSP8Q13202 625 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 KRT32Q14532 448 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 R3HDM1Q15032 1099 aaKnown RBP5.82□□□□□ -1.48
SRP54-211ENST00000556445 EPHA7Q15375 998 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 ZXDCQ2QGD7 858 aaPredicted RBP5.82□□□□□ -1.48
SRP54-211ENST00000556445 TUBB8Q3ZCM7 444 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 ESRP1Q6NXG1 681 aaKnown RBP5.82□□□□□ -1.48
SRP54-211ENST00000556445 CWC27Q6UX04 472 aaKnown RBP5.82□□□□□ -1.48
SRP54-211ENST00000556445 LDHAL6AQ6ZMR3 332 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 C1orf122Q6ZSJ8 110 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 ATG9AQ7Z3C6 839 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 TAX1BP1Q86VP1 789 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 USP7Q93009 1102 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 BORCS6Q96GS4 357 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 FUBP3Q96I24 572 aaKnown RBP eCLIP5.82□□□□□ -1.48
SRP54-211ENST00000556445 MAML3Q96JK9 1138 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 AIFM3Q96NN9 605 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 ELF4Q99607 663 aaPredicted RBP5.82□□□□□ -1.48
SRP54-211ENST00000556445 DPYSL5Q9BPU6 564 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 UTP14AQ9BVJ6 771 aaKnown RBP5.82□□□□□ -1.48
SRP54-211ENST00000556445 TM6SF1Q9BZW5 370 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 KLC2Q9H0B6 622 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 OR10A2Q9H208 303 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 BOLA2Q9H3K6 86 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 OXSMQ9NWU1 459 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 HMG20BQ9P0W2 317 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 GIT1Q9Y2X7 761 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 NR2E1Q9Y466 385 aa5.82□□□□□ -1.48
SRP54-211ENST00000556445 CCDC171Q6TFL3 1326 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 KPNA6O60684 536 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 PRKD3O94806 890 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 SLC5A1P13866 664 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 SLC9A1P19634 815 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 CR2P20023 1033 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 SELENOPP49908 381 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 NEK4P51957 841 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 DSG1Q02413 1049 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 ROM1Q03395 351 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 HGFACQ04756 655 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 ANKRD1Q15327 319 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 ZNF174Q15697 407 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 HLFQ16534 295 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 INAVAQ3KP66 663 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 CCDC152Q4G0S7 254 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 ZSCAN25Q6NSZ9 544 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 USP30Q70CQ3 517 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 RSRC2Q7L4I2 434 aaKnown RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 KIF18BQ86Y91 864 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 RTKN2Q8IZC4 609 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 FAM43AQ8N2R8 423 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 KBTBD3Q8NAB2 608 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 GIMAP8Q8ND71 665 aaPredicted RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 KLHDC4Q8TBB5 520 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 FAM89AQ96GI7 184 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 ZSCAN31Q96LW9 406 aaPredicted RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 LSG1Q9H089 658 aaKnown RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 OSBPL5Q9H0X9 879 aaPredicted RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 HELLSQ9NRZ9 838 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 RASSF1Q9NS23 344 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 TRMT13Q9NUP7 481 aaKnown RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 H2AFY2Q9P0M6 372 aaPredicted RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 DBNLQ9UJU6 430 aaKnown RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 TRPC5Q9UL62 973 aaPredicted RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 ZFR2Q9UPR6 939 aaKnown RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 APOBEC2Q9Y235 224 aaKnown RBP5.81□□□□□ -1.48
SRP54-211ENST00000556445 TSC22D4Q9Y3Q8 395 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 SPO11Q9Y5K1 396 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 THSD7AQ9UPZ6 1657 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 ZNF609O15014 1411 aa5.81□□□□□ -1.48
SRP54-211ENST00000556445 RTL9Q8NET4 1388 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 MROH5Q6ZUA9 1318 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 COL5A3P25940 1745 aaPredicted RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 A0A1B0GUL7 405 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 UBA6A0AVT1 1052 aaPredicted RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 ZNF891A8MT65 544 aaPredicted RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 RPS6KA4O75676 772 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 CAMTA2O94983 1202 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 IFIT1P09914 478 aaKnown RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 UQCRFS1P1P0C7P4 283 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 MYBL2P10244 700 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 GPTP24298 496 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 RECQLP46063 649 aaPredicted RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 MEOX1P50221 254 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 USP14P54578 494 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 MAP3K12Q12852 859 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 MYBPC3Q14896 1274 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 TAF11Q15544 211 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 CCDC92Q53HC0 331 aaPredicted RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 METTL24Q5JXM2 366 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 TTC39AQ5SRH9 613 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 SLFN12LQ6IEE8 588 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 ZNF585AQ6P3V2 769 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 CHST15Q7LFX5 561 aaPredicted RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 PNMA8AQ86V59 439 aaPredicted RBP5.8□□□□□ -1.48
SRP54-211ENST00000556445 FUKQ8N0W3 1084 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 OR8H2Q8N162 312 aa5.8□□□□□ -1.48
SRP54-211ENST00000556445 OR5AN1Q8NGI8 311 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms