RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SEPT11Q9NVA2 429 aaKnown RBP8.86□□□□□ -0.99
ATXN3-235ENST00000556082 ZDHHC3Q9NYG2 299 aa8.86□□□□□ -0.99
ATXN3-235ENST00000556082 ZHX1Q9UKY1 873 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-235ENST00000556082 L1RE1Q9UN81 338 aa8.86□□□□□ -0.99
ATXN3-235ENST00000556082 COG5Q9UP83 839 aa8.86□□□□□ -0.99
ATXN3-235ENST00000556082 NUB1Q9Y5A7 615 aa8.86□□□□□ -0.99
ATXN3-235ENST00000556082 PLXNB2O15031 1838 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 A0A087WZ62 844 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 A6NJY4 79 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 TMCO5BA8MYB1 307 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 FAM155AB1AL88 458 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 CCDC188H7C350 402 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 KCNK3O14649 394 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 MAP2K7O14733 419 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 DYNC1LI2O43237 492 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 B4GALT5O43286 388 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 CLSTN1O94985 981 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 TBC1D8O95759 1140 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 STAU1O95793 577 aaKnown RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 CST3P01034 146 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 TNNC2P02585 160 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 GJB1P08034 283 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 RHOXF2BP0C7M4 288 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 ZNF286BP0CG31 522 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 STAG3L1P0CL83 205 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 ARAFP10398 606 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 KRT5P13647 590 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 ABCB4P21439 1286 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 TNFRSF8P28908 595 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 ATICP31939 592 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 CXCR5P32302 372 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 CPT1AP50416 773 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 YWHAEP62258 255 aaKnown RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 VSNL1P62760 191 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 IGBP1P78318 339 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 NKX3-2P78367 333 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 ADAM17P78536 824 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 TRPC3Q13507 836 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 PPP2R5EQ16537 467 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 LONRF2Q1L5Z9 754 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 EML3Q32P44 896 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 MAP9Q49MG5 647 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 LMBRD2Q68DH5 695 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 PHF13Q86YI8 300 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 KAT2BQ92831 832 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 ABHD17AQ96GS6 310 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 ANKRD36BP1Q96IX9 119 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 TSPAN18Q96SJ8 248 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 NAP1L3Q99457 506 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 APBA2Q99767 749 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 RHOXF2Q9BQY4 288 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 FDXACB1Q9BRP7 624 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 FUT8Q9BYC5 575 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 ZCCHC2Q9C0B9 1178 aaKnown RBP8.85□□□□□ -0.99
ATXN3-235ENST00000556082 NIF3L1Q9GZT8 377 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 XYLT2Q9H1B5 865 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 PDZD7Q9H5P4 517 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 PLEKHA5Q9HAU0 1116 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 OSGEPQ9NPF4 335 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 CTTNBP2NLQ9P2B4 639 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 AKT3Q9Y243 479 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 PCDHB4Q9Y5E5 795 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 ALG6Q9Y672 507 aa8.85□□□□□ -0.99
ATXN3-235ENST00000556082 PGRMC1O00264 195 aaKnown RBP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 DDX3YO15523 660 aaKnown RBP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 ADCY6O43306 1168 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 TSPAN1O60635 241 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 LSM8O95777 96 aaKnown RBP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 SMIM10L2AP0DMW4 78 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 SMIM10L2BP0DMW5 78 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 HARSP12081 509 aaKnown RBP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 ARF4P18085 180 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 CTNNA2P26232 953 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 HOXC8P31273 242 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 MYL6P60660 151 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 TNNC1P63316 161 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 TFAMQ00059 246 aaKnown RBP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 C2orf54Q08AI8 447 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 DCAF4L1Q3SXM0 396 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 SEZ6Q53EL9 994 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 TAF3Q5VWG9 929 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 HDXQ7Z353 690 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 DNAAF5Q86Y56 855 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 EFCAB13Q8IY85 973 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 THNSL1Q8IYQ7 743 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 MCOLN2Q8IZK6 566 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 NME8Q8N427 588 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 TTC39CQ8N584 583 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 UBL4BQ8N7F7 174 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 RBBP8NLQ8NC74 664 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 CXorf38Q8TB03 319 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.84□□□□□ -0.99
ATXN3-235ENST00000556082 CD101Q93033 1021 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 ZBTB10Q96DT7 871 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 MS4A14Q96JA4 679 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 ARID3AQ99856 593 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 LRRC1Q9BTT6 524 aa8.84□□□□□ -0.99
ATXN3-235ENST00000556082 GCOM2Q9BZD3 368 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms