RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 RBAKQ9NYW8 714 aaPredicted RBP21.28■■□□□ 1
PRKCH-219ENST00000555906 TBC1D7Q9P0N9 293 aa21.28■■□□□ 1
PRKCH-219ENST00000555906 PCDHB13Q9Y5F0 798 aa21.28■■□□□ 1
PRKCH-219ENST00000555906 A0A087X0B3 334 aa21.27■■□□□ 1
PRKCH-219ENST00000555906 LDHAP00338 332 aaKnown RBP21.27■■□□□ 1
PRKCH-219ENST00000555906 TDGF1P13385 188 aa21.27■■□□□ 1
PRKCH-219ENST00000555906 IDEP14735 1019 aa21.27■■□□□ 1
PRKCH-219ENST00000555906 NASPP49321 788 aaPredicted RBP21.27■■□□□ 1
PRKCH-219ENST00000555906 WNT7BP56706 349 aa21.27■■□□□ 1
PRKCH-219ENST00000555906 DCP1BQ8IZD4 617 aaKnown RBP21.27■■□□□ 1
PRKCH-219ENST00000555906 SAAL1Q96ER3 474 aa21.27■■□□□ 1
PRKCH-219ENST00000555906 C8orf33Q9H7E9 229 aaPredicted RBP21.27■■□□□ 1
PRKCH-219ENST00000555906 IL21Q9HBE4 155 aa21.27■■□□□ 1
PRKCH-219ENST00000555906 PRAMEF12O95522 483 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 HAPLN1P10915 354 aaPredicted RBP21.26■□□□□ 0.99
PRKCH-219ENST00000555906 CCNE1P24864 410 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 POLR2BP30876 1174 aaKnown RBP21.26■□□□□ 0.99
PRKCH-219ENST00000555906 CCR3P51677 355 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 TFAMQ00059 246 aaKnown RBP21.26■□□□□ 0.99
PRKCH-219ENST00000555906 PPP2R5DQ14738 602 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 ARHGAP29Q52LW3 1261 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 TSSK4Q6SA08 328 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 KIAA2013Q8IYS2 634 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 LRRC52Q8N7C0 313 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 C1orf127Q8N9H9 656 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 TASP1Q9H6P5 420 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 ABI2Q9NYB9 513 aaPredicted RBP21.26■□□□□ 0.99
PRKCH-219ENST00000555906 ZMYM5Q9UJ78 669 aa21.26■□□□□ 0.99
PRKCH-219ENST00000555906 DPYSL4O14531 572 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 ITGB3P05106 788 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 CHRNB1P11230 501 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 CYP4F8P98187 520 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 TSPY1Q01534 308 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 LRRC32Q14392 662 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 LRRTM3Q86VH5 581 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 SYCP3Q8IZU3 236 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 ZSWIM2Q8NEG5 633 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 CACTINQ8WUQ7 758 aaKnown RBP21.25■□□□□ 0.99
PRKCH-219ENST00000555906 LEO1Q8WVC0 666 aaPredicted RBP21.25■□□□□ 0.99
PRKCH-219ENST00000555906 FGFBP2Q9BYJ0 223 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 TMEM206Q9H813 350 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 LMAN1LQ9HAT1 526 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 PANK4Q9NVE7 773 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 ITGA11Q9UKX5 1188 aa21.25■□□□□ 0.99
PRKCH-219ENST00000555906 SMG5Q9UPR3 1016 aaKnown RBP21.25■□□□□ 0.99
PRKCH-219ENST00000555906 MYBPHLA2RUH7 354 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 SLC38A8A6NNN8 435 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 K7ELQ4 463 aaPredicted RBP21.24■□□□□ 0.99
PRKCH-219ENST00000555906 STX6O43752 255 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 EXTL3O43909 919 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 CTHP32929 405 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 KPNA1P52294 538 aaPredicted RBP21.24■□□□□ 0.99
PRKCH-219ENST00000555906 PLCB2Q00722 1185 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 NFE2Q16621 373 aaPredicted RBP21.24■□□□□ 0.99
PRKCH-219ENST00000555906 RALGPS2Q86X27 583 aaPredicted RBP21.24■□□□□ 0.99
PRKCH-219ENST00000555906 CCDC65Q8IXS2 484 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 PDCL2Q8N4E4 241 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 CXorf38Q8TB03 319 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 SPATA18Q8TC71 538 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 BPIFB1Q8TDL5 484 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 LRRC3BQ96PB8 259 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 CBWD1Q9BRT8 395 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 TNMDQ9H2S6 317 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 NCDNQ9UBB6 729 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 L1RE1Q9UN81 338 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 AGAP1Q9UPQ3 857 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 PCDHB5Q9Y5E4 795 aa21.24■□□□□ 0.99
PRKCH-219ENST00000555906 PTPRDP23468 1912 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 SPECC1L-ADORA2AF8WAN1 911 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 KIAA0391O15091 583 aaKnown RBP21.23■□□□□ 0.99
PRKCH-219ENST00000555906 NRLP54845 237 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 TAF12Q16514 161 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 STXBP4Q6ZWJ1 553 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 TMEM86AQ8N2M4 240 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 DCLK2Q8N568 766 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 RMDN1Q96DB5 314 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 ABCB6Q9NP58 842 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 GREB1Q4ZG55 1949 aa21.23■□□□□ 0.99
PRKCH-219ENST00000555906 HELZP42694 1942 aaKnown RBP21.22■□□□□ 0.99
PRKCH-219ENST00000555906 DDX6P26196 483 aaKnown RBP eCLIP21.22■□□□□ 0.99
PRKCH-219ENST00000555906 SOX9P48436 509 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 CDR1P51861 262 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 BFSP1Q12934 665 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 STK38Q15208 465 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 GPD1LQ8N335 351 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 PDILTQ8N807 584 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 LINC00301Q8NCQ3 95 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 GIPC2Q8TF65 315 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 SECISBP2LQ93073 1101 aaKnown RBP21.22■□□□□ 0.99
PRKCH-219ENST00000555906 ZFYVE19Q96K21 471 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 ACBD6Q9BR61 282 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 MTMR12Q9C0I1 747 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 CUEDC2Q9H467 287 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 TMLHEQ9NVH6 421 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 GDAP2Q9NXN4 497 aa21.22■□□□□ 0.99
PRKCH-219ENST00000555906 ANAPC1Q9H1A4 1944 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 GOLGA8IPA6NC78 632 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 GOLGA8JA6NMD2 632 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 HUS1O60921 280 aa21.21■□□□□ 0.99
PRKCH-219ENST00000555906 PRPF6O94906 941 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms