RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 PARPBPQ9NWS1 579 aa5.89□□□□□ -1.47
ATXN3-233ENST00000555816 TMEM260Q9NX78 707 aa5.89□□□□□ -1.47
ATXN3-233ENST00000555816 AATFQ9NY61 560 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATXN3-233ENST00000555816 MSRAQ9UJ68 235 aa5.89□□□□□ -1.47
ATXN3-233ENST00000555816 PA2G4Q9UQ80 394 aaKnown RBP5.89□□□□□ -1.47
ATXN3-233ENST00000555816 GIT1Q9Y2X7 761 aa5.89□□□□□ -1.47
ATXN3-233ENST00000555816 ALPK3Q96L96 1907 aa5.89□□□□□ -1.47
ATXN3-233ENST00000555816 MGAMO43451 1857 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 CRTAMO95727 393 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 UQCRFS1P1P0C7P4 283 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 VCAM1P19320 739 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 HSD3B2P26439 372 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 MSX2P35548 267 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-233ENST00000555816 ADCY8P40145 1251 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 TFCP2Q12800 502 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 RAB30Q15771 203 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 SHROOM1Q2M3G4 852 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-233ENST00000555816 FAM47AQ5JRC9 791 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 TMEM240Q5SV17 173 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 NAA16Q6N069 864 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-233ENST00000555816 TATDN1Q6P1N9 297 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 ANKRD35Q8N283 1001 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 NUP133Q8WUM0 1156 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 RABGGTAQ92696 567 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 LRFN3Q9BTN0 628 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 CELF4Q9BZC1 486 aaKnown RBP5.88□□□□□ -1.47
ATXN3-233ENST00000555816 SPATC1LQ9H0A9 340 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 RPAP3Q9H6T3 665 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-233ENST00000555816 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 XPNPEP3Q9NQH7 507 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 TLR9Q9NR96 1032 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 UCKL1Q9NWZ5 548 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 CDC42EP3Q9UKI2 254 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 PCDHA9Q9Y5H5 950 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 FLT1P17948 1338 aa5.88□□□□□ -1.47
ATXN3-233ENST00000555816 DOCK3Q8IZD9 2030 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 GRXCR1A8MXD5 290 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 GOLGA6L22H0YM25 854 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 FOXP2O15409 715 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 PGK1P00558 417 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 ADH4P08319 380 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 C1SP09871 688 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 FCER1AP12319 257 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 APEX1P27695 318 aaKnown RBP5.87□□□□□ -1.47
ATXN3-233ENST00000555816 DNM2P50570 870 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 ABCB5Q2M3G0 1257 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 CERKLQ49MI3 558 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-233ENST00000555816 TMEM31Q5JXX7 168 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 IGFL4Q6B9Z1 124 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 TMPRSS6Q8IU80 811 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 GPR135Q8IZ08 494 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 TMEM199Q8N511 208 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 MB21D1Q8N884 522 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 ACER1Q8TDN7 264 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 ASB15Q8WXK1 588 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 SSH1Q8WYL5 1049 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 HERVK_113Q902F9 699 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 DLG3Q92796 817 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 MAML3Q96JK9 1138 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 MAGEB10Q96LZ2 347 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-233ENST00000555816 GBP4Q96PP9 640 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 EPHX3Q9H6B9 360 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 SLC28A3Q9HAS3 691 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 STARD7Q9NQZ5 370 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 SAP30BPQ9UHR5 308 aaKnown RBP5.87□□□□□ -1.47
ATXN3-233ENST00000555816 SERPINB13Q9UIV8 391 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 MRPS23Q9Y3D9 190 aaKnown RBP5.87□□□□□ -1.47
ATXN3-233ENST00000555816 B3GALT1Q9Y5Z6 326 aa5.87□□□□□ -1.47
ATXN3-233ENST00000555816 ELP1O95163 1332 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 MROH7Q68CQ1 1323 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 ERC2O15083 957 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 CDC45O75419 566 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 SLC25A27O95847 323 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 FGBP02675 491 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 AKR1A1P14550 325 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 MC4RP32245 332 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 MCAMP43121 646 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 CDK7P50613 346 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 ACLYP53396 1101 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 SEC23AQ15436 765 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 FOXB2Q5VYV0 432 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 PSRC1Q6PGN9 363 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-233ENST00000555816 ZNF365Q70YC5 407 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 HOMER1Q86YM7 354 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 CERS3Q8IU89 383 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 NOSTRINQ8IVI9 506 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 D2HGDHQ8N465 521 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 KLHDC9Q8NEP7 349 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 ZNF483Q8TF39 744 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-233ENST00000555816 APPBP2Q92624 585 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 E2F7Q96AV8 911 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 MTIF3Q9H2K0 278 aaKnown RBP5.86□□□□□ -1.47
ATXN3-233ENST00000555816 IKZF4Q9H2S9 585 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 TBX21Q9UL17 535 aa5.86□□□□□ -1.47
ATXN3-233ENST00000555816 A0A1B0GUL6 1792 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 A0A087X1B8 175 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 H2AFYO75367 372 aaKnown RBP5.85□□□□□ -1.47
ATXN3-233ENST00000555816 MMEP08473 750 aa5.85□□□□□ -1.47
ATXN3-233ENST00000555816 CSF2RAP15509 400 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms