RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 SHC4Q6S5L8 630 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 ARID3BQ8IVW6 561 aaPredicted RBP16.6■□□□□ 0.25
SNX6-205ENST00000555648 ADSSL1Q8N142 457 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 TMEM86AQ8N2M4 240 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 ZSWIM2Q8NEG5 633 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 GIPC2Q8TF65 315 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 FAM3CQ92520 227 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 BORCS6Q96GS4 357 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 HINFPQ9BQA5 517 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 LPIN3Q9BQK8 851 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 LRRC3Q9BY71 257 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 MTMR12Q9C0I1 747 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 TRPV5Q9NQA5 729 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 DDX43Q9NXZ2 648 aaKnown RBP16.6■□□□□ 0.25
SNX6-205ENST00000555648 SNX9Q9Y5X1 595 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 PIAS3Q9Y6X2 628 aa16.6■□□□□ 0.25
SNX6-205ENST00000555648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.59■□□□□ 0.25
SNX6-205ENST00000555648 PRPF40AO75400 957 aaKnown RBP16.59■□□□□ 0.25
SNX6-205ENST00000555648 HAPLN1P10915 354 aaPredicted RBP16.59■□□□□ 0.25
SNX6-205ENST00000555648 KPNA1P52294 538 aaPredicted RBP16.59■□□□□ 0.25
SNX6-205ENST00000555648 CSTF1Q05048 431 aaKnown RBP16.59■□□□□ 0.25
SNX6-205ENST00000555648 E2F4Q16254 413 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 DUOXA2Q1HG44 320 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 HS2ST1Q7LGA3 356 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 HPS3Q969F9 1004 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 FNBP1Q96RU3 617 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 C7orf25Q9BPX7 421 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 TASP1Q9H6P5 420 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 HSPBP1Q9NZL4 362 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 ZMYM5Q9UJ78 669 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 TRIOO75962 3097 aa16.59■□□□□ 0.25
SNX6-205ENST00000555648 NRG2O14511 850 aaPredicted RBP16.58■□□□□ 0.24
SNX6-205ENST00000555648 CHADO15335 359 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
SNX6-205ENST00000555648 PCSK1P29120 753 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 RPS9P46781 194 aaKnown RBP16.58■□□□□ 0.24
SNX6-205ENST00000555648 LHX1P48742 406 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 WNT7BP56706 349 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 RPL10AP62906 217 aaKnown RBP16.58■□□□□ 0.24
SNX6-205ENST00000555648 PPP2R5DQ14738 602 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 STXBP5Q5T5C0 1151 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 LMBRD2Q68DH5 695 aaPredicted RBP16.58■□□□□ 0.24
SNX6-205ENST00000555648 C1orf228Q6PIY5 440 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 UNC13DQ70J99 1090 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 GAREM2Q75VX8 874 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 LRRTM3Q86VH5 581 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 GPIHBP1Q8IV16 184 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 NELFCDQ8IXH7 590 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 ADGRF2Q8IZF7 708 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 TOP6BLQ8N6T0 577 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 SPATA18Q8TC71 538 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 ATRIPQ8WXE1 791 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 MSANTD3Q96H12 275 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 ACBD6Q9BR61 282 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 PI4K2AQ9BTU6 479 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 INTS13Q9NVM9 706 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 THG1LQ9NWX6 298 aaKnown RBP16.58■□□□□ 0.24
SNX6-205ENST00000555648 FBXO4Q9UKT5 387 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 L1RE1Q9UN81 338 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 MAGED2Q9UNF1 606 aaPredicted RBP16.58■□□□□ 0.24
SNX6-205ENST00000555648 DOCK6Q96HP0 2047 aa16.58■□□□□ 0.24
SNX6-205ENST00000555648 UBE4BO95155 1302 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 CSH1P0DML2 217 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 CSH2P0DML3 217 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 ATF6P18850 670 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 AFMP43652 599 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 CYP4F8P98187 520 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 ARHGAP29Q52LW3 1261 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 CNNM4Q6P4Q7 775 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 CBWD2Q8IUF1 395 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 SPATA2LQ8IUW3 424 aaPredicted RBP16.57■□□□□ 0.24
SNX6-205ENST00000555648 RDH13Q8NBN7 331 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 GLIS3Q8NEA6 775 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 MRPS31Q92665 395 aaKnown RBP16.57■□□□□ 0.24
SNX6-205ENST00000555648 CLDN23Q96B33 292 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 HPDLQ96IR7 371 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 BLZF1Q9H2G9 400 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 C8orf33Q9H7E9 229 aaPredicted RBP16.57■□□□□ 0.24
SNX6-205ENST00000555648 GDAP2Q9NXN4 497 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 OBP2AQ9NY56 170 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 PCDHA7Q9UN72 937 aa16.57■□□□□ 0.24
SNX6-205ENST00000555648 CLSTN1O94985 981 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 DLATP10515 647 aaKnown RBP16.56■□□□□ 0.24
SNX6-205ENST00000555648 TNNI1P19237 187 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 ACAT1P24752 427 aaKnown RBP16.56■□□□□ 0.24
SNX6-205ENST00000555648 CCNE1P24864 410 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 AVPR1AP37288 418 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 CYP2J2P51589 502 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 SNRPFP62306 86 aaKnown RBP16.56■□□□□ 0.24
SNX6-205ENST00000555648 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 ZNF528Q3MIS6 628 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 INTS6LQ5JSJ4 861 aaKnown RBP16.56■□□□□ 0.24
SNX6-205ENST00000555648 WDR49Q8IV35 697 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 ZNF507Q8TCN5 953 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 MMS19Q96T76 1030 aa16.56■□□□□ 0.24
SNX6-205ENST00000555648 LMAN1LQ9HAT1 526 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms