RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 ZNF66Q6ZN08 573 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 B3GALNT2Q8NCR0 500 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 TMIEQ8NEW7 156 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 SNX19Q92543 992 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 DMRTA2Q96SC8 542 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 SMOQ99835 787 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 BRD9Q9H8M2 597 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 KLC4Q9NSK0 619 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 NOP58Q9Y2X3 529 aaKnown RBP4.95□□□□□ -1.62
SCFD1-216ENST00000555550 NEU2Q9Y3R4 380 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 PCDHA3Q9Y5H8 950 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 NR2E3Q9Y5X4 410 aa4.95□□□□□ -1.62
SCFD1-216ENST00000555550 hCG_2014768A0A024R1R8 64 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 LRRC14BA6NHZ5 514 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 ZNF785A8K8V0 405 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 TARM1B6A8C7 271 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 F2RL2O00254 374 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 ZRANB2O95218 330 aaKnown RBP eCLIP4.94□□□□□ -1.62
SCFD1-216ENST00000555550 TTLL1O95922 423 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 ANXA1P04083 346 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 RHOP08100 348 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 CYP2D6P10635 497 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 PDCP20941 246 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 ANAPC15P60006 121 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 DSC2Q02487 901 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 SUPT20HL1Q3ZLR7 823 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 SLC44A4Q53GD3 710 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 CCDC157Q569K6 752 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 RUSC1-AS1Q66K80 236 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 AWAT2Q6E213 333 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 NEK8Q86SG6 692 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 CFAP52Q8N1V2 620 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 CHMP4CQ96CF2 233 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 AASDHPPTQ9NRN7 309 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 TBC1D30Q9Y2I9 924 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 ADGRA2Q96PE1 1338 aa4.94□□□□□ -1.62
SCFD1-216ENST00000555550 GCOM1H8Y6P7 765 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-216ENST00000555550 ARIH2O95376 493 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 FTLP02792 175 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-216ENST00000555550 CT47B1P0C2W7 299 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-216ENST00000555550 NHLRC4P0CG21 123 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-216ENST00000555550 CYP2C19P33261 490 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 CCT8P50990 548 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 CCT4P50991 539 aaKnown RBP4.93□□□□□ -1.62
SCFD1-216ENST00000555550 ANXA11P50995 505 aaKnown RBP4.93□□□□□ -1.62
SCFD1-216ENST00000555550 NXPH1P58417 271 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 CEP78Q5JTW2 689 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 MORN5Q5VZ52 161 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 TAPT1Q6NXT6 567 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 SLC2A7Q6PXP3 512 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 SLC30A10Q6XR72 485 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 TECPR1Q7Z6L1 1165 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 DENND1AQ8TEH3 1009 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 HSPBAP1Q96EW2 488 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 GPATCH3Q96I76 525 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 TRIB1Q96RU8 372 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 BRINP2Q9C0B6 783 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 CFAP97Q9P2B7 532 aa4.93□□□□□ -1.62
SCFD1-216ENST00000555550 FEZ2Q9UHY8 353 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-216ENST00000555550 POLRMTO00411 1230 aaKnown RBP4.92□□□□□ -1.62
SCFD1-216ENST00000555550 URI1O94763 535 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-216ENST00000555550 GJB1P08034 283 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 CCKBRP32239 447 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 PHKA1P46020 1223 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 PIK3CGP48736 1102 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 ZNF135P52742 658 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-216ENST00000555550 FOXG1P55316 489 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-216ENST00000555550 ITIH3Q06033 890 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 SLC18B1Q6NT16 456 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 ZNF517Q6ZMY9 492 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-216ENST00000555550 USP45Q70EL2 814 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 CATIPQ7Z7H3 387 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 CPA6Q8N4T0 437 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 TNPO1Q92973 898 aaKnown RBP4.92□□□□□ -1.62
SCFD1-216ENST00000555550 RFKQ969G6 155 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 SPRTNQ9H040 489 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-216ENST00000555550 SIDT1Q9NXL6 827 aaKnown RBP4.92□□□□□ -1.62
SCFD1-216ENST00000555550 ELOVL5Q9NYP7 299 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 DKK3Q9UBP4 350 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 ABCF2Q9UG63 623 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 IP6K2Q9UHH9 426 aa4.92□□□□□ -1.62
SCFD1-216ENST00000555550 PPEF2O14830 753 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 SLC16A6O15403 523 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 GNAI2P04899 355 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 FTH1P19P0C7X4 201 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 EBLN1P0CF75 366 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 VCAM1P19320 739 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 DRD4P21917 467 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 NEK2P51955 445 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 NOGQ13253 232 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 PGS1Q32NB8 556 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 TMEM240Q5SV17 173 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 HEATR3Q7Z4Q2 680 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 PDSS2Q86YH6 399 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 SCAMP4Q969E2 229 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 C1orf43Q9BWL3 253 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 SEMA4CQ9C0C4 833 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 WDCPQ9H6R7 721 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 ANLNQ9NQW6 1124 aa4.91□□□□□ -1.62
SCFD1-216ENST00000555550 LMBRD1Q9NUN5 540 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms