RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 VSX1Q9NZR4 365 aaPredicted RBP4.29□□□□□ -1.72
SRP54-207ENST00000555535 F5H697 171 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 SOAT2O75908 522 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 ABLIM3O94929 683 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 JUPP14923 745 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 PCSK6P29122 969 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 SLC6A9P48067 706 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 CTXN1P60606 82 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 DHCR24Q15392 516 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 RBMS2Q15434 407 aaKnown RBP4.28□□□□□ -1.72
SRP54-207ENST00000555535 UBAP2Q5T6F2 1119 aaKnown RBP4.28□□□□□ -1.72
SRP54-207ENST00000555535 STRA8Q7Z7C7 330 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 AOPEPQ8N6M6 819 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 TGFBRAP1Q8WUH2 860 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 VTA1Q9NP79 307 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 DMRT3Q9NQL9 472 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 JKAMPQ9P055 326 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 MAPRE3Q9UPY8 281 aa4.28□□□□□ -1.72
SRP54-207ENST00000555535 MYBBP1AQ9BQG0 1328 aaKnown RBP4.27□□□□□ -1.73
SRP54-207ENST00000555535 AMY1AP04745 511 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 ATP5F1P24539 256 aaPredicted RBP4.27□□□□□ -1.73
SRP54-207ENST00000555535 IL1R2P27930 398 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 SESN3P58005 492 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 CERKLQ49MI3 558 aaPredicted RBP4.27□□□□□ -1.73
SRP54-207ENST00000555535 PABPC1LQ4VXU2 614 aaKnown RBP4.27□□□□□ -1.73
SRP54-207ENST00000555535 TAPT1Q6NXT6 567 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 KCNK18Q7Z418 384 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 RNF180Q86T96 592 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 LMBR1Q8WVP7 490 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 USP7Q93009 1102 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 KLHL32Q96NJ5 620 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 SMOQ99835 787 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 ACTRT3Q9BYD9 372 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 QRSL1Q9H0R6 528 aaKnown RBP4.27□□□□□ -1.73
SRP54-207ENST00000555535 IFT22Q9H7X7 185 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 POT1Q9NUX5 634 aa4.27□□□□□ -1.73
SRP54-207ENST00000555535 PRSS47A8MTI9 375 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 H0YIZ8 118 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 ANXA1P04083 346 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 PRF1P14222 555 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 NDUFV1P49821 464 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 SEPT2Q15019 361 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 LEXMQ3ZCV2 418 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 UBR7Q8N806 425 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 POC1BQ8TC44 478 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 TRIB1Q96RU8 372 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 PACSIN1Q9BY11 444 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 AMBRA1Q9C0C7 1298 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 DKK3Q9UBP4 350 aa4.26□□□□□ -1.73
SRP54-207ENST00000555535 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 H7C1Q1 480 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 ZEB2O60315 1214 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 ULK1O75385 1050 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 USP1O94782 785 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 CRYABP02511 175 aaKnown RBP4.25□□□□□ -1.73
SRP54-207ENST00000555535 CHRM5P08912 532 aaPredicted RBP4.25□□□□□ -1.73
SRP54-207ENST00000555535 SLC6A4P31645 630 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 SLC5A3P53794 718 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 RHDQ02161 417 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 PCID2Q5JVF3 399 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 TRIM72Q6ZMU5 477 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 ZNF365Q70YC5 407 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 DCP1BQ8IZD4 617 aaKnown RBP4.25□□□□□ -1.73
SRP54-207ENST00000555535 NSUN7Q8NE18 718 aaKnown RBP4.25□□□□□ -1.73
SRP54-207ENST00000555535 IL17RDQ8NFM7 739 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 NR4A3Q92570 626 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 ZC3H10Q96K80 434 aaKnown RBP4.25□□□□□ -1.73
SRP54-207ENST00000555535 TTC1Q99614 292 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 SH2B3Q9UQQ2 575 aa4.25□□□□□ -1.73
SRP54-207ENST00000555535 GOLGA8AA7E2F4 631 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 POC1B-GALNT4F8VUJ3 575 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 GTPBP1O00178 669 aaKnown RBP4.24□□□□□ -1.73
SRP54-207ENST00000555535 DSCR3O14972 297 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 GRM6O15303 877 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 GYS2P54840 703 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 SCAND1P57086 179 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 STRN3Q13033 797 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 DDX46Q7L014 1031 aaKnown RBP4.24□□□□□ -1.73
SRP54-207ENST00000555535 PIM3Q86V86 326 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 GALNT4Q8N4A0 578 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 ZGPATQ8N5A5 531 aaKnown RBP4.24□□□□□ -1.73
SRP54-207ENST00000555535 KLHDC4Q8TBB5 520 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 IMPG2Q9BZV3 1241 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 SLCO5A1Q9H2Y9 848 aa4.24□□□□□ -1.73
SRP54-207ENST00000555535 FOXP1Q9H334 677 aaPredicted RBP4.24□□□□□ -1.73
SRP54-207ENST00000555535 H3BNX3 289 aa4.23□□□□□ -1.73
SRP54-207ENST00000555535 SLC43A1O75387 559 aa4.23□□□□□ -1.73
SRP54-207ENST00000555535 CYP2C18P33260 490 aa4.23□□□□□ -1.73
SRP54-207ENST00000555535 SRSF2Q01130 221 aaKnown RBP4.23□□□□□ -1.73
SRP54-207ENST00000555535 TRIM71Q2Q1W2 868 aaKnown RBP4.23□□□□□ -1.73
SRP54-207ENST00000555535 TOR2AQ5JU69 321 aa4.23□□□□□ -1.73
SRP54-207ENST00000555535 FAM136AQ96C01 138 aa4.23□□□□□ -1.73
SRP54-207ENST00000555535 DAZAP1Q96EP5 407 aaKnown RBP4.23□□□□□ -1.73
SRP54-207ENST00000555535 LRIG1Q96JA1 1093 aa4.23□□□□□ -1.73
SRP54-207ENST00000555535 C7orf25Q9BPX7 421 aa4.23□□□□□ -1.73
SRP54-207ENST00000555535 DLL3Q9NYJ7 618 aa4.23□□□□□ -1.73
SRP54-207ENST00000555535 SCAF8Q9UPN6 1271 aaKnown RBP4.23□□□□□ -1.73
SRP54-207ENST00000555535 SQORQ9Y6N5 450 aa4.23□□□□□ -1.73
SRP54-207ENST00000555535 UBE2Q2LH0YL09 131 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms