RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CISHQ9NSE2 258 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 IFNKQ9P0W0 207 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 CDH9Q9ULB4 789 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 MAFFQ9ULX9 164 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 ADAM12O43184 909 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 CLASP2O75122 1294 aaKnown RBP13.54□□□□□ -0.24
SYNE2-219ENST00000555323 ADH1AP07327 375 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 UCHL3P15374 230 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 OR1D2P34982 312 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 RAP1GAPP47736 663 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 NDST1P52848 882 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 MFAP3P55082 362 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 YWHAEP62258 255 aaKnown RBP13.54□□□□□ -0.24
SYNE2-219ENST00000555323 APBA1Q02410 837 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 INTS6LQ5JSJ4 861 aaKnown RBP13.54□□□□□ -0.24
SYNE2-219ENST00000555323 TPGS2Q68CL5 300 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 TMEM184AQ6ZMB5 413 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 ADGRD2Q7Z7M1 963 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 LRRTM3Q86VH5 581 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 SLC22A17Q8WUG5 538 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 KAT5Q92993 513 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 PPP2R3CQ969Q6 453 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 ARID3AQ99856 593 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 XPO4Q9C0E2 1151 aaKnown RBP13.54□□□□□ -0.24
SYNE2-219ENST00000555323 GANQ9H2C0 597 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 TLE6Q9H808 572 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 DNAJC12Q9UKB3 198 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 CDY1Q9Y6F8 540 aa13.54□□□□□ -0.24
SYNE2-219ENST00000555323 SZT2Q5T011 3432 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 FSD2A1L4K1 749 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 WDR27A2RRH5 827 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 A8MXQ7 604 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 AP5Z1O43299 807 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 CBFA2T2O43439 604 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 TPM3P06753 285 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 PDGFRBP09619 1106 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 ATF2P15336 505 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
SYNE2-219ENST00000555323 RPL17P18621 184 aaKnown RBP13.53□□□□□ -0.24
SYNE2-219ENST00000555323 KLRC2P26717 231 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 KLK7P49862 253 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 CLCN4P51793 760 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 ROR1Q01973 937 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 COL19A1Q14993 1142 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 FIGNQ5HY92 759 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 GJB7Q6PEY0 223 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 RTL10Q7L3V2 364 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 DCP1BQ8IZD4 617 aaKnown RBP13.53□□□□□ -0.24
SYNE2-219ENST00000555323 HDAC7Q8WUI4 952 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 SHC3Q92529 594 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 TNIP3Q96KP6 325 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 TMEM209Q96SK2 561 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 LSM14BQ9BX40 385 aaKnown RBP13.53□□□□□ -0.24
SYNE2-219ENST00000555323 NT5C1AQ9BXI3 368 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 STK33Q9BYT3 514 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 HSFX1Q9UBD0 423 aa13.53□□□□□ -0.24
SYNE2-219ENST00000555323 MYBPHLA2RUH7 354 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 RNF225M0QZC1 329 aaPredicted RBP13.52□□□□□ -0.25
SYNE2-219ENST00000555323 PER2O15055 1255 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 EPHB6O15197 1021 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 TGM5O43548 720 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 HCRTO43612 131 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 NCK2O43639 380 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 CLSTN1O94985 981 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 PAPLNO95428 1278 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 CD58P19256 250 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 IGFBP4P22692 258 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 ACAT1P24752 427 aaKnown RBP13.52□□□□□ -0.25
SYNE2-219ENST00000555323 ZNF132P52740 706 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 RAD23BP54727 409 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 TSPY1Q01534 308 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 HYAL1Q12794 435 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 MAPRE1Q15691 268 aaKnown RBP13.52□□□□□ -0.25
SYNE2-219ENST00000555323 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.25
SYNE2-219ENST00000555323 TCEAL5Q5H9L2 206 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 IQCEQ6IPM2 695 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 NEK11Q8NG66 645 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 MYCBPAPQ8TBZ2 947 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 C2orf15Q8WU43 125 aaKnown RBP13.52□□□□□ -0.25
SYNE2-219ENST00000555323 MYLIPQ8WY64 445 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 TMEM176AQ96HP8 235 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 TWNKQ96RR1 684 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 SYT15Q9BQS2 421 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 NUP58Q9BVL2 599 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 EDEM3Q9BZQ6 932 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 GPR88Q9GZN0 384 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 ELOVL4Q9GZR5 314 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 DNAI2Q9GZS0 605 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 CRTAC1Q9NQ79 661 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 FAM207AQ9NSI2 230 aaPredicted RBP13.52□□□□□ -0.25
SYNE2-219ENST00000555323 CEP72Q9P209 647 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 AFF4Q9UHB7 1163 aaKnown RBP13.52□□□□□ -0.25
SYNE2-219ENST00000555323 GTF3C4Q9UKN8 822 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 KIAA1257Q9ULG3 409 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 FHOD1Q9Y613 1164 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 MYO7AQ13402 2215 aa13.52□□□□□ -0.25
SYNE2-219ENST00000555323 ITIH6Q6UXX5 1313 aa13.51□□□□□ -0.25
SYNE2-219ENST00000555323 FOXN3O00409 490 aaPredicted RBP13.51□□□□□ -0.25
SYNE2-219ENST00000555323 ATP2C2O75185 946 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms