RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TSPY1Q01534 308 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 APBA1Q02410 837 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 TRIM14Q14142 442 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 MAPRE1Q15691 268 aaKnown RBP17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 IQCEQ6IPM2 695 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 GJB7Q6PEY0 223 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 PRSS55Q6UWB4 352 aaPredicted RBP17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 OSTM1Q86WC4 334 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 VSTM4Q8IW00 320 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 CRYBG2Q8N1P7 616 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 KAT5Q92993 513 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 RTP3Q9BQQ7 232 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 TSC2P49815 1807 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 TRANK1O15050 2925 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 A0A1W2PQJ5 194 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 C2CD2LO14523 706 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 CD58P19256 250 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 GRIN2CQ14957 1233 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 PLPP4Q5VZY2 271 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 DCP1BQ8IZD4 617 aaKnown RBP17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 CLSTN3Q9BQT9 956 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 TTYH3Q9C0H2 523 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 ZCWPW1Q9H0M4 648 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 PRDM12Q9H4Q4 367 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 KIAA1257Q9ULG3 409 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 MAFFQ9ULX9 164 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 PCDHB4Q9Y5E5 795 aa17.53■□□□□ 0.4
SPTLC2-203ENST00000554901 EPHB6O15197 1021 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 TEX28O15482 410 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 PAEPP09466 180 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 CNPP09543 421 aaKnown RBP17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 LMO2P25791 158 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 IRS1P35568 1242 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 MRE11P49959 708 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 GPR17Q13304 367 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 RAPGEF1Q13905 1077 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 RAB33AQ14088 237 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 GSE1Q14687 1217 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 DRAP1Q14919 205 aaPredicted RBP17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 NFE2Q16621 373 aaPredicted RBP17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 ARHGAP44Q17R89 818 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 INTS6LQ5JSJ4 861 aaKnown RBP17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 TPGS2Q68CL5 300 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 CACNA2D4Q7Z3S7 1137 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 PPFIBP1Q86W92 1011 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 B3GALNT2Q8NCR0 500 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 OR10T2Q8NGX3 314 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 WHAMMQ8TF30 809 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 AUTS2Q8WXX7 1259 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 SPAG5Q96R06 1193 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 CDCA3Q99618 268 aaPredicted RBP17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 SYT15Q9BQS2 421 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 CDY1Q9Y6F8 540 aa17.52■□□□□ 0.4
SPTLC2-203ENST00000554901 HIDE1A8MVS5 230 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 F8VZ95 297 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 RFXAPO00287 272 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 OR1D2P34982 312 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 ZNF132P52740 706 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 RAD23BP54727 409 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 JAM2P57087 298 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 FAM171BQ6P995 826 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 TMEM270Q6UE05 265 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 FAM71AQ8IYT1 594 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 ZNF397Q8NF99 534 aaPredicted RBP17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 C2orf15Q8WU43 125 aaKnown RBP17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 TMEM176AQ96HP8 235 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 KLHL5Q96PQ7 755 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 PKMYT1Q99640 499 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 NUCKS1Q9H1E3 243 aaKnown RBP17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 NME7Q9Y5B8 376 aa17.52■□□□□ 0.39
SPTLC2-203ENST00000554901 COL4A4P53420 1690 aaPredicted RBP17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 PDGFRBP09619 1106 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 CPB1P15086 417 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 PTPN1P18031 435 aaKnown RBP17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 CDC25BP30305 580 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 CA8P35219 290 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 STAT1P42224 750 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 BPIFB4P59827 614 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 ROR1Q01973 937 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 RSPO2Q6UXX9 243 aaPredicted RBP17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 SLC4A11Q8NBS3 891 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 RBBP8NLQ8NC74 664 aaPredicted RBP17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 ZNF461Q8TAF7 563 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 MYCBPAPQ8TBZ2 947 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 GAS2L1Q99501 681 aaPredicted RBP17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 GPR88Q9GZN0 384 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 ELOVL4Q9GZR5 314 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 NSUN3Q9H649 340 aaKnown RBP17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 NLRC4Q9NPP4 1024 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 HSFX1Q9UBD0 423 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 AJAP1Q9UKB5 411 aaPredicted RBP17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 CAPN11Q9UMQ6 739 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 MYO9BQ13459 2157 aa17.51■□□□□ 0.39
SPTLC2-203ENST00000554901 FOXN3O00409 490 aaPredicted RBP17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 ABLIM3O94929 683 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 TPM1P09493 284 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 CCDC172P0C7W6 258 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 KRT5P13647 590 aa17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 RPL17P18621 184 aaKnown RBP17.5■□□□□ 0.39
SPTLC2-203ENST00000554901 ACAT1P24752 427 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms