RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ERVK-5Q9HDB9 667 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 TBC1D22BQ9NU19 505 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 RGL1Q9NZL6 768 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 WRAP73Q9P2S5 460 aaPredicted RBP11.87□□□□□ -0.51
SRP54-205ENST00000554803 ADAMTS1Q9UHI8 967 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 RASAL2Q9UJF2 1139 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 SALL4Q9UJQ4 1053 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 ODF2LQ9ULJ1 636 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 NFU1Q9UMS0 254 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 USTQ9Y2C2 406 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 UTP11Q9Y3A2 253 aaKnown RBP11.87□□□□□ -0.51
SRP54-205ENST00000554803 CDY2AQ9Y6F7 541 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 SQORQ9Y6N5 450 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 PATJQ8NI35 1801 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 MYH10P35580 1976 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 DOCK8Q8NF50 2099 aa11.87□□□□□ -0.51
SRP54-205ENST00000554803 ZNF233A6NK53 670 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 HIDE1A8MVS5 230 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 KCNK3O14649 394 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 RPLP2P05387 115 aaKnown RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 SSBP05455 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
SRP54-205ENST00000554803 MAPTP10636 758 aaKnown RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 PON1P27169 355 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 CXCR5P32302 372 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 CARSP49589 748 aaKnown RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 ATXN1P54253 815 aaKnown RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 KRT76Q01546 638 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 PTK2Q05397 1052 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 COL9A2Q14055 689 aaPredicted RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 GIT2Q14161 759 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 CTTNQ14247 550 aaKnown RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 UGCGQ16739 394 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 HS2ST1Q7LGA3 356 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 CATSPER3Q86XQ3 398 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 SLC9A9Q8IVB4 645 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 GSPT2Q8IYD1 628 aaKnown RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 THNSL1Q8IYQ7 743 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 CNPY4Q8N129 248 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 COLGALT1Q8NBJ5 622 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 CASKIN2Q8WXE0 1202 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 RIN2Q8WYP3 895 aaPredicted RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 GPR20Q99678 358 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 JPH1Q9HDC5 661 aaPredicted RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 NGRNQ9NPE2 291 aaKnown RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 SLC9A2Q9UBY0 812 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 AMFRQ9UKV5 643 aa11.86□□□□□ -0.51
SRP54-205ENST00000554803 SETXQ7Z333 2677 aaKnown RBP11.86□□□□□ -0.51
SRP54-205ENST00000554803 MAPK13O15264 365 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 PMM2O15305 246 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 RAD51CO43502 376 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 NR3C1P04150 777 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 ADRB1P08588 477 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 ACTR2P61160 394 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 SLC7A5Q01650 507 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 CETN1Q12798 172 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 KIAA1841Q6NSI8 718 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 ZNF746Q6NUN9 644 aaPredicted RBP11.85□□□□□ -0.51
SRP54-205ENST00000554803 DPY19L2P1Q6NXN4 242 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 FOXR1Q6PIV2 292 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 FAM43BQ6ZT52 329 aaPredicted RBP11.85□□□□□ -0.51
SRP54-205ENST00000554803 SUMF1Q8NBK3 374 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 DNAJB3Q8WWF6 145 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 IFT81Q8WYA0 676 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 CTNNBL1Q8WYA6 563 aaPredicted RBP11.85□□□□□ -0.51
SRP54-205ENST00000554803 ARL8AQ96BM9 186 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 EEF2KMTQ96G04 330 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 HES6Q96HZ4 224 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 HSD17B14Q9BPX1 270 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 TCF25Q9BQ70 676 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 ENTPD7Q9NQZ7 604 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 CYP26B1Q9NR63 512 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 FBXL21Q9UKT6 434 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 LRFN2Q9ULH4 789 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 DUSP12Q9UNI6 340 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 HCFC2Q9Y5Z7 792 aa11.85□□□□□ -0.51
SRP54-205ENST00000554803 RALGAPA1Q6GYQ0 2036 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 GSTTP1A0A1W2PQM5 241 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 MBLAC1A4D2B0 266 aaPredicted RBP11.84□□□□□ -0.51
SRP54-205ENST00000554803 WDR64B1ANS9 1081 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 E9PMD0 336 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 KRIT1O00522 736 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 SLITRK3O94933 977 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 EOMESO95936 686 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 FTCDO95954 541 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 NUDT17P0C025 328 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 SOX5P35711 763 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 JAK3P52333 1124 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 PTENP60484 403 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 MRPS6P82932 125 aaKnown RBP11.84□□□□□ -0.51
SRP54-205ENST00000554803 PLCB3Q01970 1234 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 ENPEPQ07075 957 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 TDGQ13569 410 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 HLTFQ14527 1009 aaKnown RBP eCLIP11.84□□□□□ -0.51
SRP54-205ENST00000554803 ARSHQ5FYA8 562 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 NAA35Q5VZE5 725 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 C11orf63Q6NUN7 778 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 ABHD15Q6UXT9 468 aa11.84□□□□□ -0.51
SRP54-205ENST00000554803 ZNF571Q7Z3V5 609 aaPredicted RBP11.84□□□□□ -0.51
SRP54-205ENST00000554803 NLRP14Q86W24 1093 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms