RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SUGP1Q8IWZ8 645 aaKnown RBP14.02□□□□□ -0.17
SHMT2-211ENST00000554310 FBXL6Q8N531 539 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 ING5Q8WYH8 240 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 TIGD1Q96MW7 591 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 ACBD6Q9BR61 282 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 DDX43Q9NXZ2 648 aaKnown RBP14.02□□□□□ -0.17
SHMT2-211ENST00000554310 FRMD4BQ9Y2L6 1034 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 ARIH1Q9Y4X5 557 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-211ENST00000554310 ASB3Q9Y575 518 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 NUMBLQ9Y6R0 609 aa14.02□□□□□ -0.17
SHMT2-211ENST00000554310 LRRIQ3A6PVS8 624 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-211ENST00000554310 GABRDO14764 452 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 MAPK13O15264 365 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 SMC2O95347 1197 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 STAU1O95793 577 aaKnown RBP14.01□□□□□ -0.17
SHMT2-211ENST00000554310 SRFP11831 508 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 CEBPBP17676 345 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 NR2F2P24468 414 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 PCSK1P29120 753 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 ATICP31939 592 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 PNOCQ13519 176 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 VEPH1Q14D04 833 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 SOWAHAQ2M3V2 549 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 INTS6LQ5JSJ4 861 aaKnown RBP14.01□□□□□ -0.17
SHMT2-211ENST00000554310 SCARA3Q6AZY7 606 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 ITIH5Q86UX2 942 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 SLC44A3Q8N4M1 653 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 TTC9BQ8N6N2 239 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 PLEKHO2Q8TD55 490 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 PARD3BQ8TEW8 1205 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 RSAD2Q8WXG1 361 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 FGF14Q92915 247 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 PSMG2Q969U7 264 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 GSDMAQ96QA5 445 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 SEPT5Q99719 369 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-211ENST00000554310 GTPBP4Q9BZE4 634 aaKnown RBP14.01□□□□□ -0.17
SHMT2-211ENST00000554310 DNAJC25Q9H1X3 360 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 SLC27A5Q9Y2P5 690 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 CACNA1HO95180 2353 aa14.01□□□□□ -0.17
SHMT2-211ENST00000554310 KINO60870 393 aaKnown RBP14□□□□□ -0.17
SHMT2-211ENST00000554310 FGF19O95750 216 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 RPL13P26373 211 aaKnown RBP14□□□□□ -0.17
SHMT2-211ENST00000554310 BIRC3Q13489 604 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 TRPC3Q13507 836 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 MGAT5BQ3V5L5 792 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 ZCWPW2Q504Y3 356 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 CEP135Q66GS9 1140 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 LRSAM1Q6UWE0 723 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 PARM1Q6UWI2 310 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 LRRTM3Q86VH5 581 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 TMC8Q8IU68 726 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 ELOA2Q8IYF1 753 aaPredicted RBP14□□□□□ -0.17
SHMT2-211ENST00000554310 SPATA20Q8TB22 786 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 TMC2Q8TDI7 906 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 KBTBD7Q8WVZ9 684 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 ABCB6Q9NP58 842 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 SLC2A4RGQ9NR83 387 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 ABI2Q9NYB9 513 aaPredicted RBP14□□□□□ -0.17
SHMT2-211ENST00000554310 FBXL21Q9UKT6 434 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 MAPK8IP1Q9UQF2 711 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 PCDHB5Q9Y5E4 795 aa14□□□□□ -0.17
SHMT2-211ENST00000554310 NARSO43776 548 aaKnown RBP13.99□□□□□ -0.17
SHMT2-211ENST00000554310 PHACTR2O75167 634 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 TACC1O75410 805 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 ECI2O75521 394 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 SOAT2O75908 522 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 FAM163BP0C2L3 166 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 HAPLN1P10915 354 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-211ENST00000554310 MYL4P12829 197 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 ATF6P18850 670 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 WARSP23381 471 aaKnown RBP13.99□□□□□ -0.17
SHMT2-211ENST00000554310 CCR2P41597 374 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 CASP4P49662 377 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 TNNC1P63316 161 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 ENPEPQ07075 957 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 EDRF1Q3B7T1 1238 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 COBLL1Q53SF7 1204 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 ZNF658Q5TYW1 1059 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-211ENST00000554310 TDRD10Q5VZ19 366 aaKnown RBP13.99□□□□□ -0.17
SHMT2-211ENST00000554310 INTS8Q75QN2 995 aaKnown RBP13.99□□□□□ -0.17
SHMT2-211ENST00000554310 OSTM1Q86WC4 334 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 HS6ST3Q8IZP7 471 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 ZNF516Q92618 1163 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 SMARCE1Q969G3 411 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 TCEAL4Q96EI5 215 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 FUBP3Q96I24 572 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHMT2-211ENST00000554310 MMS19Q96T76 1030 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 LRRC3Q9BY71 257 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 XYLT2Q9H1B5 865 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 KCNH6Q9H252 994 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 VRTNQ9H8Y1 702 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 WNT16Q9UBV4 365 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 PTPRDP23468 1912 aa13.99□□□□□ -0.17
SHMT2-211ENST00000554310 NUP210Q8TEM1 1887 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-211ENST00000554310 IKBKBO14920 756 aa13.98□□□□□ -0.17
SHMT2-211ENST00000554310 MOSPD3O75425 235 aa13.98□□□□□ -0.17
SHMT2-211ENST00000554310 LETM1O95202 739 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-211ENST00000554310 CST3P01034 146 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-211ENST00000554310 PDGFBP01127 241 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms