RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CSGALNACT2Q8N6G5 542 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.98□□□□□ -0.97
PSEN1-209ENST00000553855 SMRP1Q8NCR6 262 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 KIAA0895Q8NCT3 520 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 C3orf58Q8NDZ4 430 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 ENGASEQ8NFI3 743 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 SLC22A17Q8WUG5 538 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 CCDC127Q96BQ5 260 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 MSLNLQ96KJ4 702 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 COL25A1Q9BXS0 654 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-209ENST00000553855 ADAM7Q9H2U9 754 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 PDE11AQ9HCR9 933 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 ZNF358Q9NW07 568 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 ZDHHC7Q9NXF8 308 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 MTRRQ9UBK8 725 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 AGAP1Q9UPQ3 857 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 MAPK8IP1Q9UQF2 711 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 NR2E1Q9Y466 385 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 USP15Q9Y4E8 981 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-209ENST00000553855 CDY1Q9Y6F8 540 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 PLXNA4Q9HCM2 1894 aa8.98□□□□□ -0.97
PSEN1-209ENST00000553855 OR6C75A6NL08 312 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 KPNA7A9QM74 516 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 M0QZQ0 153 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 PIRO00625 290 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 CYB561D2O14569 222 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 PRRG1O14668 218 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 CETN3O15182 167 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 TGM5O43548 720 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 GADD45BO75293 160 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-209ENST00000553855 EFEMP2O95967 443 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 LRG1P02750 347 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 NR3C1P04150 777 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 ITGB3P05106 788 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 HNRNPA1P09651 372 aaKnown RBP eCLIP8.97□□□□□ -0.97
PSEN1-209ENST00000553855 TRIM21P19474 475 aaKnown RBP8.97□□□□□ -0.97
PSEN1-209ENST00000553855 NR2F2P24468 414 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 POLR2BP30876 1174 aaKnown RBP8.97□□□□□ -0.97
PSEN1-209ENST00000553855 SLC19A1P41440 591 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 LILRA4P59901 499 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 RBM10P98175 930 aaKnown RBP8.97□□□□□ -0.97
PSEN1-209ENST00000553855 BFSP1Q12934 665 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 ADAM9Q13443 819 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 BIRC3Q13489 604 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 RAB33AQ14088 237 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 CBX2Q14781 532 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-209ENST00000553855 UVSSAQ2YD98 709 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 PPM1LQ5SGD2 360 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 TPGS2Q68CL5 300 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 OVOS1Q6IE37 1185 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 TMC5Q6UXY8 1006 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 C15orf39Q6ZRI6 1047 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 RTL10Q7L3V2 364 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 SLC9A9Q8IVB4 645 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 ADHFE1Q8IWW8 467 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 ELMOD1Q8N336 334 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 LRRC52Q8N7C0 313 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 CCDC150Q8NCX0 1101 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 CMASQ8NFW8 434 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-209ENST00000553855 VN1R2Q8NFZ6 395 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 ACSF2Q96CM8 615 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-209ENST00000553855 SENP8Q96LD8 212 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 CGRRF1Q99675 332 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 CLSTN3Q9BQT9 956 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 PHF7Q9BWX1 381 aaPredicted RBP8.97□□□□□ -0.97
PSEN1-209ENST00000553855 MTMR12Q9C0I1 747 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 INTS13Q9NVM9 706 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 SEPT3Q9UH03 358 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 MAFFQ9ULX9 164 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 POLIQ9UNA4 740 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 TRAF3IP3Q9Y228 551 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 PCDHA5Q9Y5H7 936 aa8.97□□□□□ -0.97
PSEN1-209ENST00000553855 CHD7Q9P2D1 2997 aa8.96□□□□□ -0.97
PSEN1-209ENST00000553855 CCDC195A0A1B0GUA6 201 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 ANO9A1A5B4 782 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 ANKRD33BA6NCL7 494 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 TMEM229AB2RXF0 380 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 TNFRSF10AO00220 468 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 MEFVO15553 781 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-209ENST00000553855 STX10O60499 249 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 C8AP07357 584 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 SPATA31D3P0C874 917 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 EPB41P11171 864 aaKnown RBP8.96□□□□□ -0.98
PSEN1-209ENST00000553855 P4HA1P13674 534 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 HOXD13P35453 343 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 PSMC2P35998 433 aaKnown RBP8.96□□□□□ -0.98
PSEN1-209ENST00000553855 TNNC1P63316 161 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 SKOR1P84550 965 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 MYL7Q01449 175 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 TSPY1Q01534 308 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 CYP24A1Q07973 514 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 PLD1Q13393 1074 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 KCNC3Q14003 757 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 LMBRD2Q68DH5 695 aaPredicted RBP8.96□□□□□ -0.98
PSEN1-209ENST00000553855 SLC8B1Q6J4K2 584 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 SYCE2Q6PIF2 218 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 CD300LGQ6UXG3 332 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 SPATA31D4Q6ZUB0 917 aa8.96□□□□□ -0.98
PSEN1-209ENST00000553855 INTS8Q75QN2 995 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms