RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 J3KRW8 73 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 FFAR3O14843 346 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 CCP110O43303 1012 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 RHOBTB3O94955 611 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 AGFG2O95081 481 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 POMCP01189 267 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 MED14OSP0DP75 135 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 CKBP12277 381 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 PI3P19957 117 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 MAN1A1P33908 653 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 GEMIN4P57678 1058 aaKnown RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 RAP2BP61225 183 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 FOXD4Q12950 439 aaPredicted RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 DDX10Q13206 875 aaKnown RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 EFR3AQ14156 821 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 NPY5RQ15761 445 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 FAM214AQ32MH5 1076 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 ARHGAP15Q53QZ3 475 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 FBXO47Q5MNV8 452 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 FAM160B1Q5W0V3 765 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 FCRL6Q6DN72 434 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 USP49Q70CQ1 688 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 KRT73Q86Y46 540 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 CNPY4Q8N129 248 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 TMTC2Q8N394 836 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 SIMC1Q8NDZ2 872 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 SPPL3Q8TCT6 385 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 OTUD7AQ8TE49 926 aaPredicted RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 KCNN1Q92952 543 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 SKA1Q96BD8 255 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 MESP1Q9BRJ9 268 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 CPEB1Q9BZB8 566 aaKnown RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.54□□□□□ -1.68
TDP1-207ENST00000553617 MS4A7Q9GZW8 240 aaPredicted RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 MSL2Q9HCI7 577 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 HEYLQ9NQ87 328 aaPredicted RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 MRPS18AQ9NVS2 196 aaKnown RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 HESX1Q9UBX0 185 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 SRP68Q9UHB9 627 aaKnown RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 ZDHHC9Q9Y397 364 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 LAS1LQ9Y4W2 734 aaKnown RBP4.54□□□□□ -1.68
TDP1-207ENST00000553617 ADAMTS20P59510 1910 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 CDHR4A6H8M9 788 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 ETV2O00321 342 aaPredicted RBP4.53□□□□□ -1.68
TDP1-207ENST00000553617 PIP5K1BO14986 540 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 EPB41L2O43491 1005 aaKnown RBP4.53□□□□□ -1.68
TDP1-207ENST00000553617 ASNA1O43681 348 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 RASSF9O75901 435 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 FAM155BO75949 473 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 INMTO95050 263 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 CYP2C9P11712 490 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 CKMT1AP12532 417 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 MCCP23508 829 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 SLC6A2P23975 617 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 TOB1P50616 345 aaPredicted RBP4.53□□□□□ -1.68
TDP1-207ENST00000553617 PNLIPRP1P54315 467 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 SLFN5Q08AF3 891 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 SLC29A2Q14542 456 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 MAPKAPK3Q16644 382 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 TMTC4Q5T4D3 741 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 ATXN7L2Q5T6C5 722 aaPredicted RBP4.53□□□□□ -1.68
TDP1-207ENST00000553617 WDR78Q5VTH9 848 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 PLAG1Q6DJT9 500 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 CRTC1Q6UUV9 634 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 MOGAT3Q86VF5 341 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 ZNF761Q86XN6 746 aaPredicted RBP4.53□□□□□ -1.68
TDP1-207ENST00000553617 XYLT1Q86Y38 959 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 GPR135Q8IZ08 494 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 CCDC150Q8NCX0 1101 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 FAM46DQ8NEK8 389 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 SHCBP1Q8NEM2 672 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 LCORQ96JN0 433 aaPredicted RBP4.53□□□□□ -1.68
TDP1-207ENST00000553617 ZSCAN31Q96LW9 406 aaPredicted RBP4.53□□□□□ -1.68
TDP1-207ENST00000553617 TCF25Q9BQ70 676 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 SIK2Q9H0K1 926 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 ZHX3Q9H4I2 956 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 ETAA1Q9NY74 926 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 GGA3Q9NZ52 723 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 DKK4Q9UBT3 224 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 CRYL1Q9Y2S2 319 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 SCINQ9Y6U3 715 aa4.53□□□□□ -1.68
TDP1-207ENST00000553617 A0A0B4J269 797 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 A0A1B0GTL3 188 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 LOC102723971A0A1B0GUV8 181 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 MYO1CO00159 1063 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 DCLK1O15075 740 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 KIF20AO95235 890 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 KRT1P04264 644 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 XRCC6P12956 609 aaKnown RBP eCLIP4.52□□□□□ -1.69
TDP1-207ENST00000553617 IDEP14735 1019 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 NPPBP16860 134 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 TNFAIP3P21580 790 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 CASP2P42575 452 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 CPT1AP50416 773 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 ARHGEF7Q14155 803 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 SLC5A9Q2M3M2 681 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 TRIM71Q2Q1W2 868 aaKnown RBP4.52□□□□□ -1.69
TDP1-207ENST00000553617 ZNF568Q3ZCX4 644 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 AMOTQ4VCS5 1084 aa4.52□□□□□ -1.69
TDP1-207ENST00000553617 HYIQ5T013 277 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms