RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 GMEB1Q9Y692 573 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 AFF2P51816 1311 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 POM121BA6NF01 834 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GOLGA8JA6NMD2 632 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 C19orf81C9J6K1 198 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GOLGA8TH3BQL2 631 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ENPP3O14638 875 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 LIN7AO14910 233 aaPredicted RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 EIF3HO15372 352 aaKnown RBP eCLIP4.26□□□□□ -1.73
RDH11-204ENST00000553578 GPAA1O43292 621 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SEC24DO94855 1032 aaPredicted RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 GHRHP01286 108 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GOLGA8HP0CJ92 632 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 HSPA6P17066 643 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 IFNAR1P17181 557 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 S100A1P23297 94 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ADH7P40394 386 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ITGA8P53708 1063 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 CRY1Q16526 586 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 MUM1Q2TAK8 710 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 BBS9Q3SYG4 887 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 RRAGBQ5VZM2 374 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SARM1Q6SZW1 724 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 MAEAQ7L5Y9 396 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 RASSF3Q86WH2 238 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SP8Q8IXZ3 490 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 MAGEB6Q8N7X4 407 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 PJA1Q8NG27 643 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GDAP1Q8TB36 358 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 CCDC127Q96BQ5 260 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SPATA9Q9BWV2 254 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 CEP44Q9C0F1 390 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SEPSECSQ9HD40 501 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 CNNM1Q9NRU3 951 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 DNAJC28Q9NX36 388 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 TRMT112Q9UI30 125 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 ZMYM5Q9UJ78 669 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ZNF148Q9UQR1 794 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 WDR90Q96KV7 1748 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 A0A1W2PRQ8 180 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 DCDC2CA8MYV0 355 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 H3BUI4 141 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 RNGTTO60942 597 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 SNRPB2P08579 225 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 CLEC2LP0C7M8 214 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 CCT6AP40227 531 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 PIK3CAP42336 1068 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GSDMDP57764 484 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 UBXN1Q04323 297 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GRIN2CQ14957 1233 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 DLGAP5Q15398 846 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SHROOM1Q2M3G4 852 aaPredicted RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 CCDC153Q494R4 210 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 METTL24Q5JXM2 366 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 MAP3K21Q5TCX8 1036 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 TMEM154Q6P9G4 183 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ELMSAN1Q6PJG2 1045 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 USP51Q70EK9 711 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 LONP2Q86WA8 852 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ERICH1Q86X53 443 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GRAMD2AQ8IUY3 354 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 PPM1KQ8N3J5 372 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 NCOA7Q8NI08 942 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 RIN2Q8WYP3 895 aaPredicted RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 C8orf76Q96K31 380 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 UQCC2Q9BRT2 126 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ASPSCR1Q9BZE9 553 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 KRT23Q9C075 422 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 CCSER1Q9C0I3 900 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 NUP62CLQ9H1M0 184 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 MRPL46Q9H2W6 279 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 KRT82Q9NSB4 513 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 DLGAP2Q9P1A6 1054 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 CAMK2AQ9UQM7 478 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GPR75-ASB3A0A0A6YYF3 556 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 TRAV20A0A0B4J274 112 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ACSL4O60488 711 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ATP6V1G2O95670 118 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 RPN1P04843 607 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 GSTT2P0CG29 244 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GSTT2BP0CG30 244 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SNHG28P0DPA3 235 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 PRKACBP22694 351 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 RXRBP28702 533 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 PHKA1P46020 1223 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 IREB2P48200 963 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 MAP3K7CLP57077 242 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 KRT83P78385 493 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 PDE1BQ01064 536 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GSTM4Q03013 218 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 GABPAQ06546 454 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 PPIDQ08752 370 aaKnown RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 PDCLQ13371 301 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 DSC3Q14574 896 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 ZNF772Q68DY9 489 aaPredicted RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 STYK1Q6J9G0 422 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 LURAP1LQ8IV03 231 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 SYT2Q8N9I0 419 aaPredicted RBP4.26□□□□□ -1.73
RDH11-204ENST00000553578 WDR48Q8TAF3 677 aa4.26□□□□□ -1.73
RDH11-204ENST00000553578 CCHCR1Q8TD31 782 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms