RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CYP4A22Q5TCH4 519 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 METTL23Q86XA0 190 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 NT5DC4Q86YG4 428 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 ELMOD1Q8N336 334 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 FSIP1Q8NA03 581 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 FAM200AQ8TCP9 573 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 ATOH1Q92858 354 aaPredicted RBP19.6■□□□□ 0.73
SHMT2-206ENST00000553529 NXPE3Q969Y0 559 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 IL21Q9HBE4 155 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 GDE1Q9NZC3 331 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 GTF3C4Q9UKN8 822 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 ITGA11Q9UKX5 1188 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 MAPK8IP1Q9UQF2 711 aa19.6■□□□□ 0.73
SHMT2-206ENST00000553529 MYBPHLA2RUH7 354 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 ECI2O75521 394 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 HAPLN1P10915 354 aaPredicted RBP19.59■□□□□ 0.73
SHMT2-206ENST00000553529 CYP2F1P24903 491 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 GABRR2P28476 465 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 ALDH1A3P47895 512 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 EPHB3P54753 998 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 DLG4P78352 724 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 KNOP1Q1ED39 458 aaKnown RBP19.59■□□□□ 0.73
SHMT2-206ENST00000553529 SLC44A4Q53GD3 710 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 STXBP4Q6ZWJ1 553 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 TMEM150AQ86TG1 271 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 CCDC105Q8IYK2 499 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 ADGRF2Q8IZF7 708 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 TTC8Q8TAM2 541 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 PSMG2Q969U7 264 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 HPDLQ96IR7 371 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 ANKRD36BP1Q96IX9 119 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 MRPL45Q9BRJ2 306 aaKnown RBP19.59■□□□□ 0.73
SHMT2-206ENST00000553529 KCNH6Q9H252 994 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 SLITRK6Q9H5Y7 841 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 DLGAP2Q9P1A6 1054 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 DSEQ9UL01 958 aa19.59■□□□□ 0.73
SHMT2-206ENST00000553529 MYO15AQ9UKN7 3530 aa19.58■□□□□ 0.73
SHMT2-206ENST00000553529 PVALEFA0A1B0GWK0 134 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 PRAMEF12O95522 483 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 RBP5P82980 135 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 MLF2Q15773 248 aaPredicted RBP19.58■□□□□ 0.72
SHMT2-206ENST00000553529 DDR2Q16832 855 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 TRAPPC11Q7Z392 1133 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 THEM5Q8N1Q8 247 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 LRRC52Q8N7C0 313 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 DTWD2Q8NBA8 298 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 RIN3Q8TB24 985 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 CACTINQ8WUQ7 758 aaKnown RBP19.58■□□□□ 0.72
SHMT2-206ENST00000553529 ERCC4Q92889 916 aaPredicted RBP19.58■□□□□ 0.72
SHMT2-206ENST00000553529 ZFYVE19Q96K21 471 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 CGRRF1Q99675 332 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 KCTD10Q9H3F6 313 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 ATXN3LQ9H3M9 355 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 CRTAC1Q9NQ79 661 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.58■□□□□ 0.72
SHMT2-206ENST00000553529 EXOC1Q9NV70 894 aa19.58■□□□□ 0.72
SHMT2-206ENST00000553529 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.58■□□□□ 0.72
SHMT2-206ENST00000553529 UBE4BO95155 1302 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 RPN1P04843 607 aaKnown RBP19.57■□□□□ 0.72
SHMT2-206ENST00000553529 PDGFRBP09619 1106 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 TNNI1P19237 187 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 RFX1P22670 979 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 SYKP43405 635 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 PSMD6Q15008 389 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 INTS6LQ5JSJ4 861 aaKnown RBP19.57■□□□□ 0.72
SHMT2-206ENST00000553529 TPRG1Q6ZUI0 275 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 WDR49Q8IV35 697 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 SMYD4Q8IYR2 804 aaPredicted RBP19.57■□□□□ 0.72
SHMT2-206ENST00000553529 XXYLT1Q8NBI6 393 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 SMARCD2Q92925 531 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 ELSPBP1Q96BH3 223 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 OXCT2Q9BYC2 517 aaPredicted RBP19.57■□□□□ 0.72
SHMT2-206ENST00000553529 DPEP3Q9H4B8 488 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 ZFP14Q9HCL3 533 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 GDAP2Q9NXN4 497 aa19.57■□□□□ 0.72
SHMT2-206ENST00000553529 FAM237AA0A1B0GTK4 181 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 LRRIQ3A6PVS8 624 aaPredicted RBP19.56■□□□□ 0.72
SHMT2-206ENST00000553529 HEPACAM2A8MVW5 462 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 ZNF197O14709 1029 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 GABRDO14764 452 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 HUS1O60921 280 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 PRPF40AO75400 957 aaKnown RBP19.56■□□□□ 0.72
SHMT2-206ENST00000553529 TADA3O75528 432 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 TNNC2P02585 160 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 PDIA4P13667 645 aaKnown RBP19.56■□□□□ 0.72
SHMT2-206ENST00000553529 HMGA1P17096 107 aaKnown RBP19.56■□□□□ 0.72
SHMT2-206ENST00000553529 TARSP26639 723 aaKnown RBP19.56■□□□□ 0.72
SHMT2-206ENST00000553529 GDI1P31150 447 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 PNPLA4P41247 253 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 RAP1GAPP47736 663 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 SOX9P48436 509 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 STARD6P59095 220 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 MYL6P60660 151 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 DPYDQ12882 1025 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 UBXN2BQ14CS0 331 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 GPR158Q5T848 1215 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 TDRD10Q5VZ19 366 aaKnown RBP19.56■□□□□ 0.72
SHMT2-206ENST00000553529 PJA1Q8NG27 643 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 MAFFQ9ULX9 164 aa19.56■□□□□ 0.72
SHMT2-206ENST00000553529 MAGED2Q9UNF1 606 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms