RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CELF3Q5SZQ8 465 aaKnown RBP13.65□□□□□ -0.22
SHMT2-205ENST00000553474 HIBCHQ6NVY1 386 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-205ENST00000553474 PIGWQ7Z7B1 504 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 EXOC3L1Q86VI1 746 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 SUGP1Q8IWZ8 645 aaKnown RBP13.65□□□□□ -0.22
SHMT2-205ENST00000553474 ZCCHC9Q8N567 271 aaKnown RBP13.65□□□□□ -0.22
SHMT2-205ENST00000553474 ARHGEF2Q92974 986 aaKnown RBP13.65□□□□□ -0.22
SHMT2-205ENST00000553474 ELMO3Q96BJ8 720 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 SLITRK1Q96PX8 696 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 GPR20Q99678 358 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 PTPN18Q99952 460 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 PLCD4Q9BRC7 762 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 ASCC2Q9H1I8 757 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-205ENST00000553474 LRRC4CQ9HCJ2 640 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 SAMD15Q9P1V8 674 aa13.65□□□□□ -0.22
SHMT2-205ENST00000553474 LIASO43766 372 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 CST3P01034 146 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-205ENST00000553474 CALCAP01258 141 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 CFHP08603 1231 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 HOXC6P09630 235 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 OSBPP22059 807 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 RDXP35241 583 aaKnown RBP13.64□□□□□ -0.23
SHMT2-205ENST00000553474 ACAP1Q15027 740 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 CNGA2Q16280 664 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 QPCTQ16769 361 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 KYAT1Q16773 422 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 ZNF699Q32M78 642 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 RNF187Q5TA31 235 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-205ENST00000553474 DCUN1D2Q6PH85 259 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 ANKRD23Q86SG2 305 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 ERICH1Q86X53 443 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 TTC13Q8NBP0 860 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 RNF149Q8NC42 400 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 MDM1Q8TC05 714 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 NKD2Q969F2 451 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-205ENST00000553474 CFAP57Q96MR6 1250 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 HERPUD2Q9BSE4 406 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 MTMR12Q9C0I1 747 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 FZD8Q9H461 694 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 SMARCAD1Q9H4L7 1026 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 PTPRHQ9HD43 1115 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 TMEM51Q9NW97 253 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 R3HDM2Q9Y2K5 976 aaKnown RBP13.64□□□□□ -0.23
SHMT2-205ENST00000553474 CAPN7Q9Y6W3 813 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 ZSWIM8A7E2V4 1837 aa13.64□□□□□ -0.23
SHMT2-205ENST00000553474 SMAPO00193 183 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 HBP1O60381 514 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 ACSL3O95573 720 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 ITGAVP06756 1048 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 KRT7P08729 469 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 TNFSF9P41273 254 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 MYL6P60660 151 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 MORF4L2Q15014 288 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 RASA2Q15283 850 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 IZUMO3Q5VZ72 239 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 GSTA5Q7RTV2 222 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 ANKS1BQ7Z6G8 1248 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 PCGF5Q86SE9 256 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 IFNL1Q8IU54 200 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 TTC39CQ8N584 583 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 FAM84AQ96KN4 292 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 HEMGNQ9BXL5 484 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 UBN1Q9NPG3 1134 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 NINJ2Q9NZG7 142 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 TNFSF13BQ9Y275 285 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 SMIM23A6NLE4 172 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 ZBTB42B2RXF5 422 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 DNALI1O14645 258 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-205ENST00000553474 GSTA1P08263 222 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 WEE2P0C1S8 567 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 HARSP12081 509 aaKnown RBP13.63□□□□□ -0.23
SHMT2-205ENST00000553474 CHKAP35790 457 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 SSR1P43307 286 aaKnown RBP13.63□□□□□ -0.23
SHMT2-205ENST00000553474 RPL7AP62424 266 aaKnown RBP13.63□□□□□ -0.23
SHMT2-205ENST00000553474 TNFAIP2Q03169 654 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 TAF1CQ15572 869 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-205ENST00000553474 KYNUQ16719 465 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 FAM187BQ17R55 369 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 LONRF1Q17RB8 773 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 C2CD6Q53TS8 623 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 ATF7IP2Q5U623 682 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 SPOCD1Q6ZMY3 1216 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 ARHGEF18Q6ZSZ5 1173 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 TDRPQ86YL5 185 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 ALLCQ8N6M5 410 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 MCEEQ96PE7 176 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 DDX23Q9BUQ8 820 aaKnown RBP13.63□□□□□ -0.23
SHMT2-205ENST00000553474 XYLT2Q9H1B5 865 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 PRMT7Q9NVM4 692 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-205ENST00000553474 SHOC2Q9UQ13 582 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 USTQ9Y2C2 406 aa13.63□□□□□ -0.23
SHMT2-205ENST00000553474 DNAJC25-GNG10A0A024R161 153 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 hCG_1818297A0A087WSY0 165 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 SIGLEC16A6NMB1 481 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 PEX10O60683 326 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 KRT1P04264 644 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 CD58P19256 250 aa13.62□□□□□ -0.23
SHMT2-205ENST00000553474 ATICP31939 592 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms