RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 INSL5Q9Y5Q6 135 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 HELZP42694 1942 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
TRAFD1-209ENST00000552896 CCDC195A0A1B0GUA6 201 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 MTMR11A4FU01 709 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 PRRG1O14668 218 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 XYLBO75191 536 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 CLSTN1O94985 981 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 OR4Q2P0C623 313 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 P4HA1P13674 534 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 WARSP23381 471 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 ERCC5P28715 1186 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 ELF1P32519 619 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 NOP14P78316 857 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 ZP2Q05996 745 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 ADCY1Q08828 1119 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 SGSM1Q2NKQ1 1148 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 WDR72Q3MJ13 1102 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 ZNF667Q5HYK9 610 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 CT47A1Q5JQC4 288 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 TCERG1LQ5VWI1 586 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 RNF19BQ6ZMZ0 732 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 DCP1BQ8IZD4 617 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 C2orf15Q8WU43 125 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 SMG7Q92540 1137 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 TMEM209Q96SK2 561 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 MMS19Q96T76 1030 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 ACBD6Q9BR61 282 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 PHF7Q9BWX1 381 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 POMKQ9H5K3 350 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 DDX43Q9NXZ2 648 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 CLUHO75153 1309 aa12.55□□□□□ -0.4
TRAFD1-209ENST00000552896 MYO10Q9HD67 2058 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 N4BP1O75113 896 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 SEC24AO95486 1093 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 VNN2O95498 520 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 PLD1Q13393 1074 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 SLC39A12Q504Y0 691 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 INTS6LQ5JSJ4 861 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 ATAT1Q5SQI0 421 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 OSTM1Q86WC4 334 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 TRIM59Q8IWR1 403 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 CCDC150Q8NCX0 1101 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 FBXL13Q8NEE6 735 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 MED15Q96RN5 788 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 UHRF1Q96T88 793 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 PKMYT1Q99640 499 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 SMYD3Q9H7B4 428 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 MMRN2Q9H8L6 949 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 CYP4F11Q9HBI6 524 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 TMEM63CQ9P1W3 806 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 CDH22Q9UJ99 828 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 YIPF1Q9Y548 306 aa12.54□□□□□ -0.4
TRAFD1-209ENST00000552896 TRIOO75962 3097 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 PMM2O15305 246 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 CCL16O15467 120 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 LRG1P02750 347 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 WEE2P0C1S8 567 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 ASPAP45381 313 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 NFE2Q16621 373 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 STX1AQ16623 288 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 KLHL40Q2TBA0 621 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 CBWD6Q4V339 395 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 SCARA5Q6ZMJ2 495 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 FEZF2Q8TBJ5 459 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 SPPL2BQ8TCT7 592 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 FAXDC2Q96IV6 333 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 PGLYRP2Q96PD5 576 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 SYT15Q9BQS2 421 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 SRRTQ9BXP5 876 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 BCO2Q9BYV7 579 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 NIF3L1Q9GZT8 377 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 SNX25Q9H3E2 840 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 THAP9Q9H5L6 903 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 PIDD1Q9HB75 910 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 WDR6Q9NNW5 1121 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 ABCB6Q9NP58 842 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 CDH9Q9ULB4 789 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 COQ4Q9Y3A0 265 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 NR2E1Q9Y466 385 aa12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 KIF26AQ9ULI4 1882 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-209ENST00000552896 P4HA2O15460 535 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 ACAT1P24752 427 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 FMO5P49326 533 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 MAPRE1Q15691 268 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 SPOPLQ6IQ16 392 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 CAVIN1Q6NZI2 390 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 SASS6Q6UVJ0 657 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 LRRTM3Q86VH5 581 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 FAM114A1Q8IWE2 563 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 ELMOD1Q8N336 334 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 TTC9BQ8N6N2 239 aa12.52□□□□□ -0.41
TRAFD1-209ENST00000552896 ATAD1Q8NBU5 361 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms