RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 NIF3L1Q9GZT8 377 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 ZCWPW1Q9H0M4 648 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 CYP4F11Q9HBI6 524 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 AVENQ9NQS1 362 aaPredicted RBP10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 CLEC1BQ9P126 229 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 UXTQ9UBK9 157 aaPredicted RBP10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 CACNG4Q9UBN1 327 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 NXF1Q9UBU9 619 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 CLUHO75153 1309 aa10.98□□□□□ -0.65
TRAFD1-208ENST00000552890 BECN2A8MW95 431 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 A8MXQ7 604 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 H3BQ06 376 aaPredicted RBP10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 I3L4J1 428 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 SPTLC1O15269 473 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 MBTPS2O43462 519 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 TBX10O75333 385 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 GLP2RO95838 553 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 CST3P01034 146 aaPredicted RBP10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 EPCAMP16422 314 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 RFX1P22670 979 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 MAGEA11P43364 429 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 PPP3CCP48454 512 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 FMO5P49326 533 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 PDE6CP51160 858 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 ARPP19P56211 112 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 MYL5Q02045 173 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 ADCY1Q08828 1119 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 KCNH2Q12809 1159 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 SOWAHAQ2M3V2 549 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 PABPC1LQ4VXU2 614 aaKnown RBP10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 LMBRD2Q68DH5 695 aaPredicted RBP10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 CAVIN1Q6NZI2 390 aaKnown RBP10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 SPATA2LQ8IUW3 424 aaPredicted RBP10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 ADHFE1Q8IWW8 467 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 SLC7A14Q8TBB6 771 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 SUSD6Q92537 303 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 ZNF516Q92618 1163 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 B3GALT6Q96L58 329 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 NT5C1BQ96P26 610 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 DUSP9Q99956 384 aaKnown RBP10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 BPIFA3Q9BQP9 254 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 SYT15Q9BQS2 421 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 NT5C1AQ9BXI3 368 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 ELOVL4Q9GZR5 314 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 XYLT2Q9H1B5 865 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 S1PR5Q9H228 398 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 WDR6Q9NNW5 1121 aaKnown RBP10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 BARX2Q9UMQ3 279 aaPredicted RBP10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 L1RE1Q9UN81 338 aa10.97□□□□□ -0.65
TRAFD1-208ENST00000552890 PTPRJQ12913 1337 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 WDR27A2RRH5 827 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 TRIM49BA6NDI0 452 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 TRIM66O15016 1216 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 CSH1P0DML2 217 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 CSH2P0DML3 217 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 RPL17P18621 184 aaKnown RBP10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 CDK11BP21127 795 aaKnown RBP10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 ANXA13P27216 316 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 PMS1P54277 932 aaKnown RBP10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 STX17P56962 302 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 STILQ15468 1287 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 MAN2A1Q16706 1144 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 DPCR1Q3MIW9 517 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 SLC39A12Q504Y0 691 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 RARS2Q5T160 578 aaKnown RBP10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 SYCE2Q6PIF2 218 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 GBP6Q6ZN66 633 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 CREBRFQ8IUR6 639 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 MYCBPAPQ8TBZ2 947 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 CNOT6LQ96LI5 555 aaKnown RBP10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 ASAH2Q9NR71 780 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 GDE1Q9NZC3 331 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 USP15Q9Y4E8 981 aaPredicted RBP10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 PCDHGC5Q9Y5F6 944 aa10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 TIMM13Q9Y5L4 95 aaPredicted RBP10.96□□□□□ -0.65
TRAFD1-208ENST00000552890 MTCL1Q9Y4B5 1905 aaKnown RBP10.96□□□□□ -0.66
TRAFD1-208ENST00000552890 PPEF2O14830 753 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 LINC01565O15544 149 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 TRIM49P0CI25 452 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 TRIM49CP0CI26 452 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 BMP1P13497 986 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 PFKLP17858 780 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 PTPN1P18031 435 aaKnown RBP10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 CDC25CP30307 473 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 GTF2F1P35269 517 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 WNT7BP56706 349 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 DLG4P78352 724 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 GCNT1Q02742 428 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 TYRO3Q06418 890 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 PPP3CAQ08209 521 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 INCA1Q0VD86 236 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 FILIP1LQ4L180 1135 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 ARHGAP15Q53QZ3 475 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 FKBP15Q5T1M5 1219 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 FAM171BQ6P995 826 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 TMC5Q6UXY8 1006 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 MTSS1LQ765P7 747 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 GLYCTKQ8IVS8 523 aa10.95□□□□□ -0.66
TRAFD1-208ENST00000552890 CRYBG2Q8N1P7 616 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms