RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 SHC3Q92529 594 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 MYLPFQ96A32 169 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 KCNK16Q96T55 309 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 HERC2P3Q9BVR0 1158 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 COLEC11Q9BWP8 271 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 APOL5Q9BWW9 433 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 MRPL9Q9BYD2 267 aaKnown RBP7.56□□□□□ -1.2
PFDN5-217ENST00000552548 ZNF576Q9H609 170 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 VRTNQ9H8Y1 702 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 CHST7Q9NS84 486 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 SLC38A7Q9NVC3 462 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 GDAP2Q9NXN4 497 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 ARHGAP20Q9P2F6 1191 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 KANSL3Q9P2N6 904 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 FBXL5Q9UKA1 691 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 PCDHB8Q9UN66 801 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 PDE4DIPQ5VU43 2346 aa7.56□□□□□ -1.2
PFDN5-217ENST00000552548 MYO7AQ13402 2215 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 A0A1W2PQC6 194 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 SOWAHDA6NJG2 315 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 A8MXQ7 604 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 TMEM189-UBE2V1I3L0A0 370 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 P4HA2O15460 535 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 MFAP3LO75121 409 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 CXCL14O95715 111 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 SOD2P04179 222 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 MMEP08473 750 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 LAG3P18627 525 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 WARSP23381 471 aaKnown RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 CYP2F1P24903 491 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 OR1D2P34982 312 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 KRT9P35527 623 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 GNL1P36915 607 aaPredicted RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 RGS7P49802 495 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 MRE11P49959 708 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 TNNC1P63316 161 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 ROR1Q01973 937 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 DLX2Q07687 328 aaPredicted RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 SV2CQ496J9 727 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 FILIP1LQ4L180 1135 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 CTXN3Q4LDR2 81 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 SLC39A12Q504Y0 691 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 RAB6CQ53S08 254 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 PPP1R26Q5T8A7 1209 aaPredicted RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 OVOS1Q6IE37 1185 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 RAD9BQ6WBX8 426 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 ZNF571Q7Z3V5 609 aaPredicted RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 DDX53Q86TM3 631 aaKnown RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 TTC30AQ86WT1 665 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 NT5DC4Q86YG4 428 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 FAM71AQ8IYT1 594 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 FUKQ8N0W3 1084 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 APPL2Q8NEU8 664 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 FBXO22Q8NEZ5 403 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 CLEC4CQ8WTT0 213 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 SLC22A17Q8WUG5 538 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 KHSRPQ92945 711 aaKnown RBP eCLIP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 MRFAP1L1Q96HT8 127 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 PIWIL1Q96J94 861 aaKnown RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 KLHL5Q96PQ7 755 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 TGS1Q96RS0 853 aaKnown RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 SMOQ99835 787 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 TCF25Q9BQ70 676 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 SYT15Q9BQS2 421 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 SYT11Q9BT88 431 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 TTPALQ9BTX7 342 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 PACSIN1Q9BY11 444 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 ZCWPW1Q9H0M4 648 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 RAB6CQ9H0N0 254 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 PRDM6Q9NQX0 595 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 PUF60Q9UHX1 559 aaKnown RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 NOCTQ9UK39 431 aaKnown RBP7.55□□□□□ -1.2
PFDN5-217ENST00000552548 STXBP5LQ9Y2K9 1186 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 CDY1Q9Y6F8 540 aa7.55□□□□□ -1.2
PFDN5-217ENST00000552548 COL4A4P53420 1690 aaPredicted RBP7.54□□□□□ -1.2
PFDN5-217ENST00000552548 TRIOBPQ9H2D6 2365 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 GTPBP10A4D1E9 387 aaKnown RBP7.54□□□□□ -1.2
PFDN5-217ENST00000552548 RCCD1A6NED2 376 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 C2orf71A6NGG8 1288 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 TMCO5BA8MYB1 307 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 H3BNC9 293 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 DDX3XO00571 662 aaKnown RBP eCLIP7.54□□□□□ -1.2
PFDN5-217ENST00000552548 ATMINO43313 823 aaPredicted RBP7.54□□□□□ -1.2
PFDN5-217ENST00000552548 N4BP1O75113 896 aaKnown RBP7.54□□□□□ -1.2
PFDN5-217ENST00000552548 CLASP2O75122 1294 aaKnown RBP7.54□□□□□ -1.2
PFDN5-217ENST00000552548 RFPL2O75678 378 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 MICAL2O94851 1124 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 STAU1O95793 577 aaKnown RBP7.54□□□□□ -1.2
PFDN5-217ENST00000552548 CYP11A1P05108 521 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 CD19P15391 556 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 PTPN1P18031 435 aaKnown RBP7.54□□□□□ -1.2
PFDN5-217ENST00000552548 BDNFP23560 247 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 ATICP31939 592 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 SOX5P35711 763 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 NDUFV1P49821 464 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 AP3M2P53677 418 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 USP46P62068 366 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 TPM4P67936 248 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 NTHL1P78549 312 aa7.54□□□□□ -1.2
PFDN5-217ENST00000552548 FMO1Q01740 532 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms