RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 GBP4Q96PP9 640 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 LBHD1Q9BQE6 289 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-208ENST00000551691 SYT3Q9BQG1 590 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 ADI1Q9BV57 179 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 APOL5Q9BWW9 433 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 B3GNT5Q9BYG0 378 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 NUP62CLQ9H1M0 184 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 CDIP1Q9H305 208 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 KCTD10Q9H3F6 313 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 PRDM12Q9H4Q4 367 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 IFT122Q9HBG6 1241 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 VEZTQ9HBM0 779 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 THEGQ9P2T0 379 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 TRMT112Q9UI30 125 aaKnown RBP4.45□□□□□ -1.7
LIMA1-208ENST00000551691 GTF2A1LQ9UNN4 478 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 PPP2R3BQ9Y5P8 575 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 MYO9BQ13459 2157 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 BAHCC1Q9P281 2608 aa4.45□□□□□ -1.7
LIMA1-208ENST00000551691 CFAP47Q6ZTR5 3102 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 MYO15AQ9UKN7 3530 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 TRIOO75962 3097 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 RHPN2P1A8MT19 583 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 GRXCR1A8MXD5 290 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 K7ESM1 405 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 PDHXO00330 501 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 UBXN7O94888 489 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 PRPF6O94906 941 aaKnown RBP4.44□□□□□ -1.7
LIMA1-208ENST00000551691 HSP90AA1P07900 732 aaKnown RBP4.44□□□□□ -1.7
LIMA1-208ENST00000551691 MMEP08473 750 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 HTR1BP28222 390 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 SERPINB3P29508 390 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 SDHAP31040 664 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 IL12RB1P42701 662 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 EPHB4P54760 987 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 GRIN1Q05586 938 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 DLX2Q07687 328 aaPredicted RBP4.44□□□□□ -1.7
LIMA1-208ENST00000551691 PPARAQ07869 468 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 TARBP2Q15633 366 aaKnown RBP4.44□□□□□ -1.7
LIMA1-208ENST00000551691 SKIDA1Q1XH10 827 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 MUM1Q2TAK8 710 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 TMEM95Q3KNT9 176 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 THEMIS2Q5TEJ8 643 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 SLFN12LQ6IEE8 588 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 PPP4R3AQ6IN85 833 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 KLHDC10Q6PID8 442 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 MILR1Q7Z6M3 343 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 SKAP1Q86WV1 359 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 RBM12BQ8IXT5 1001 aaKnown RBP4.44□□□□□ -1.7
LIMA1-208ENST00000551691 OR14C36Q8NHC7 312 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 PPP1R35Q8TAP8 253 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 SH3RF2Q8TEC5 729 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 LRTOMTQ8WZ04 291 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 BADQ92934 168 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 HDAC10Q969S8 669 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 C16orf92Q96LL3 132 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 TBCBQ99426 244 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 GPR20Q99678 358 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 MYL10Q9BUA6 226 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.44□□□□□ -1.7
LIMA1-208ENST00000551691 MAF1Q9H063 256 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 TMEM60Q9H2L4 133 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 CHD7Q9P2D1 2997 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 USP18Q9UMW8 372 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 LZTS1Q9Y250 596 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 WDR87Q6ZQQ6 2873 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 LAMB2P55268 1798 aa4.44□□□□□ -1.7
LIMA1-208ENST00000551691 ZFHX2Q9C0A1 2572 aaPredicted RBP4.44□□□□□ -1.7
LIMA1-208ENST00000551691 DOCK3Q8IZD9 2030 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 ABHD14A-ACY1A0A1B0GW23 586 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 PRSS38A1L453 326 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 SRGAP3O43295 1099 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 B3GALT2O43825 422 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 TUSC2O75896 110 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 PCDH8O95206 1070 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 FGAP02671 866 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 FTLP02792 175 aaPredicted RBP4.43□□□□□ -1.7
LIMA1-208ENST00000551691 CETPP11597 493 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 COL6A1P12109 1028 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 KLRK1P26718 216 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 CCT5P48643 541 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 NRG3P56975 720 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 HERVK_113P62684 666 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 SLC6A3Q01959 620 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 ALDH6A1Q02252 535 aaKnown RBP4.43□□□□□ -1.7
LIMA1-208ENST00000551691 AIMP1Q12904 312 aaKnown RBP4.43□□□□□ -1.7
LIMA1-208ENST00000551691 MOGSQ13724 837 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 DLGAP5Q15398 846 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 PROSER3Q2NL68 480 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 ANO6Q4KMQ2 910 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 PARP10Q53GL7 1025 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 PITRM1Q5JRX3 1037 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 CATSPEREQ5SY80 951 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 TTLL5Q6EMB2 1281 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 KIAA1841Q6NSI8 718 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 OVCH2Q7RTZ1 564 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 CERS5Q8N5B7 392 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.43□□□□□ -1.7
LIMA1-208ENST00000551691 TEX19Q8NA77 164 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 SPATA5Q8NB90 893 aa4.43□□□□□ -1.7
LIMA1-208ENST00000551691 SMARCC2Q8TAQ2 1214 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms