RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	PKP4	Q99569	1192 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	HGH1	Q9BTY7	390 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	OR10A4	Q9H209	315 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	KLC4	Q9NSK0	619 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	ACTR10	Q9NZ32	417 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	VPS18	Q9P253	973 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	LARS	Q9P2J5	1176 aa	Known RBP	4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	TRIM10	Q9UDY6	481 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	TRIM33	Q9UPN9	1127 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	DNM3	Q9UQ16	869 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	AK5	Q9Y6K8	562 aa		4.09	□□□□□ -1.75
CNOT2-231	ENST00000551483	VWA3A	A6NCI4	1184 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	OR5K4	A6NMS3	321 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483		E7ENQ6	273 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	FPGT	O14772	594 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	MTX2	O75431	263 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	KRT37	O76014	449 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	FTCD	O95954	541 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	EGFR	P00533	1210 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	PENK	P01210	267 aa	Predicted RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	CYP1A1	P04798	512 aa	Predicted RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	FAM153B	P0C7A2	387 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	GSTT2	P0CG29	244 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	GSTT2B	P0CG30	244 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	GFAP	P14136	432 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	CHRM3	P20309	590 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	HOXA11	P31270	313 aa	Predicted RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	PITPNB	P48739	271 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	TMED10	P49755	219 aa	Known RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	NNT	Q13423	1086 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	BMP2KL	Q5H9B9	411 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	CEP85L	Q5SZL2	805 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	SIGIRR	Q6IA17	410 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	LRP10	Q7Z4F1	713 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	LIX1L	Q8IVB5	337 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	CCDC50	Q8IVM0	306 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	TBC1D19	Q8N5T2	526 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	SLC22A18	Q96BI1	424 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	EXOC2	Q96KP1	924 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	TTLL2	Q9BWV7	592 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	AGO4	Q9HCK5	861 aa	Known RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	TRPM5	Q9NZQ8	1165 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	DNAJB4	Q9UDY4	337 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	DNAI1	Q9UI46	699 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	RWDD3	Q9Y3V2	267 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	DDX3X	O00571	662 aa	Known RBP eCLIP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	GPR39	O43194	453 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	DNAJB5	O75953	348 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	CCNDBP1	O95273	360 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	NPTXR	O95502	500 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	EYA4	O95677	639 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	NFIC	P08651	508 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	DHRS4L1	P0CG22	281 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	ACSL1	P33121	698 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	ALDH3A2	P51648	485 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	TRA2B	P62995	288 aa	Known RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	PPP2R2A	P63151	447 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	DSC2	Q02487	901 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	GSTM4	Q03013	218 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	NONO	Q15233	471 aa	Known RBP eCLIP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	CYP27C1	Q4G0S4	372 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	TRAPPC3L	Q5T215	181 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	ZNF425	Q6IV72	752 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	ARMC6	Q6NXE6	501 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	CAVIN1	Q6NZI2	390 aa	Known RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	ZCCHC12	Q6PEW1	402 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	WDR49	Q8IV35	697 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	NKAIN4	Q8IVV8	208 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	CHERP	Q8IWX8	916 aa	Known RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	SLC26A7	Q8TE54	656 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	WDR60	Q8WVS4	1066 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	PRCC	Q92733	491 aa	Predicted RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	ATP2A3	Q93084	1043 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	RFK	Q969G6	155 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	L3MBTL2	Q969R5	705 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	ZUFSP	Q96AP4	578 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	MSANTD3	Q96H12	275 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	CEP19	Q96LK0	163 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	USP26	Q9BXU7	913 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	ARHGAP39	Q9C0H5	1083 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	POLH	Q9Y253	713 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483	MSRB2	Q9Y3D2	182 aa		4.09	□□□□□ -1.76
CNOT2-231	ENST00000551483		A0A1B0GVG6	124 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	RAB19	A4D1S5	217 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	SYCE1L	A8MT33	242 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	PRR5-ARHGAP8	B1AHC4	643 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483		H3BQV1	296 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	IDH3B	O43837	385 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	GMFG	O60234	142 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	CRTAM	O95727	393 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	HOXB1	P14653	301 aa	Predicted RBP	4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	CTRB1	P17538	263 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	NR1H2	P55055	460 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	MFAP3	P55082	362 aa		4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	ARF3	P61204	181 aa	Predicted RBP	4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	ARF1	P84077	181 aa	Known RBP	4.08	□□□□□ -1.76
CNOT2-231	ENST00000551483	SCRN3	Q0VDG4	424 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms