RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 MAPK7Q13164 816 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 COL9A2Q14055 689 aaPredicted RBP12□□□□□ -0.49
PFDN5-212ENST00000550880 PDGFRLQ15198 375 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 ZRSR1Q15695 479 aaKnown RBP12□□□□□ -0.49
PFDN5-212ENST00000550880 TCEAL6Q6IPX3 200 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 SYT13Q7L8C5 426 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 CPA6Q8N4T0 437 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 TTC9BQ8N6N2 239 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 MAB21L3Q8N8X9 362 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 KDF1Q8NAX2 398 aaPredicted RBP12□□□□□ -0.49
PFDN5-212ENST00000550880 TMEM161BQ8NDZ6 487 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 GIPC2Q8TF65 315 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 TCEAL3Q969E4 200 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 FAM212AQ96EL1 285 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 HHIPQ96QV1 700 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 P2RY13Q9BPV8 354 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 DUSP15Q9H1R2 295 aaPredicted RBP12□□□□□ -0.49
PFDN5-212ENST00000550880 TDP1Q9NUW8 608 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 LARSQ9P2J5 1176 aaKnown RBP12□□□□□ -0.49
PFDN5-212ENST00000550880 EBF1Q9UH73 591 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 SDK1Q7Z5N4 2213 aa12□□□□□ -0.49
PFDN5-212ENST00000550880 BCLAF3A2AJT9 711 aaKnown RBP11.99□□□□□ -0.49
PFDN5-212ENST00000550880 CEACAM1P13688 526 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 SCP2P22307 547 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 GALK1P51570 392 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 NEK4P51957 841 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 RAD51AP2Q09MP3 1159 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 PSMD2Q13200 908 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 USP39Q53GS9 565 aaKnown RBP11.99□□□□□ -0.49
PFDN5-212ENST00000550880 SH3PXD2AQ5TCZ1 1133 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 SPATA1Q5VX52 437 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 TRIM68Q6AZZ1 485 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 DTHD1Q6ZMT9 781 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 KCTD17Q8N5Z5 321 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 C4orf32Q8N8J7 132 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 RPLP0P6Q8NHW5 317 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 SPPL2BQ8TCT7 592 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 MRPS31Q92665 395 aaKnown RBP11.99□□□□□ -0.49
PFDN5-212ENST00000550880 ZCWPW1Q9H0M4 648 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 IL21Q9HBE4 155 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 TMEM9BQ9NQ34 198 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 HPS4Q9NQG7 708 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 KCND2Q9NZV8 630 aa11.99□□□□□ -0.49
PFDN5-212ENST00000550880 HNRNPDLO14979 420 aaKnown RBP11.98□□□□□ -0.49
PFDN5-212ENST00000550880 OGTO15294 1046 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 CYP11A1P05108 521 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 ATF6P18850 670 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 CSRP1P21291 193 aaKnown RBP11.98□□□□□ -0.49
PFDN5-212ENST00000550880 TNFSF9P41273 254 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 GUCY2FP51841 1108 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 DGKEP52429 567 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 NR1H3Q13133 447 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 DMC1Q14565 340 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 ENOX2Q16206 610 aaKnown RBP11.98□□□□□ -0.49
PFDN5-212ENST00000550880 C9orf57Q5W0N0 161 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 DCP1BQ8IZD4 617 aaKnown RBP11.98□□□□□ -0.49
PFDN5-212ENST00000550880 FAM184AQ8NB25 1140 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 TSTD1Q8NFU3 115 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 FBXO18Q8NFZ0 1043 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 OR10T2Q8NGX3 314 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 USP13Q92995 863 aaPredicted RBP11.98□□□□□ -0.49
PFDN5-212ENST00000550880 CD101Q93033 1021 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 CDK5RAP3Q96JB5 506 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 ADAM33Q9BZ11 813 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 ABI2Q9NYB9 513 aaPredicted RBP11.98□□□□□ -0.49
PFDN5-212ENST00000550880 UXTQ9UBK9 157 aaPredicted RBP11.98□□□□□ -0.49
PFDN5-212ENST00000550880 FAM208BQ5VWN6 2430 aa11.98□□□□□ -0.49
PFDN5-212ENST00000550880 NUP210Q8TEM1 1887 aaPredicted RBP11.97□□□□□ -0.49
PFDN5-212ENST00000550880 LNP1A1A4G5 178 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 CYB561D2O14569 222 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 GIPC1O14908 333 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 DCLK1O15075 740 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 EIF5BO60841 1220 aaKnown RBP11.97□□□□□ -0.49
PFDN5-212ENST00000550880 CSH1P0DML2 217 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 CSH2P0DML3 217 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 HAPLN1P10915 354 aaPredicted RBP11.97□□□□□ -0.49
PFDN5-212ENST00000550880 ARSAP15289 507 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 CDC25AP30304 524 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 GJA4P35212 333 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 PRPHP41219 470 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 IFNAR2P48551 515 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 NLRP12P59046 1061 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 HMGN5P82970 282 aaKnown RBP11.97□□□□□ -0.49
PFDN5-212ENST00000550880 ZNF268Q14587 947 aaPredicted RBP11.97□□□□□ -0.49
PFDN5-212ENST00000550880 NBR1Q14596 966 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 TMEM132DQ14C87 1099 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 ACAP1Q15027 740 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 JADE1Q6IE81 842 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 MON1AQ86VX9 555 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 TMEM130Q8N3G9 435 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 SYT2Q8N9I0 419 aaPredicted RBP11.97□□□□□ -0.49
PFDN5-212ENST00000550880 TTC16Q8NEE8 873 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 ATP2A3Q93084 1043 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 PYM1Q9BRP8 204 aaKnown RBP11.97□□□□□ -0.49
PFDN5-212ENST00000550880 LLPHQ9BRT6 129 aaKnown RBP11.97□□□□□ -0.49
PFDN5-212ENST00000550880 MSTO1Q9BUK6 570 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 HAPLN2Q9GZV7 340 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 SLC32A1Q9H598 525 aa11.97□□□□□ -0.49
PFDN5-212ENST00000550880 DUS2Q9NX74 493 aaKnown RBP11.97□□□□□ -0.49
PFDN5-212ENST00000550880 MAGED2Q9UNF1 606 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms