RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	RELL1	Q8IUW5	271 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	CCDC105	Q8IYK2	499 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	UBR7	Q8N806	425 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	NIPA2	Q8N8Q9	360 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	IPO4	Q8TEX9	1081 aa	Known RBP	12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	ALG3	Q92685	438 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	SPATA33	Q96N06	139 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	POP1	Q99575	1024 aa	Known RBP	12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	PAGR1	Q9BTK6	254 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	TXLNGY	Q9BZA5	131 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	PTPRH	Q9HD43	1115 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	TXNRD2	Q9NNW7	524 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	EHD2	Q9NZN4	543 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	ANAPC7	Q9UJX3	599 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	DERA	Q9Y315	318 aa		12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	ATXN2	Q99700	1313 aa	Known RBP	12.53	□□□□□ -0.4
LETMD1-223	ENST00000550442	EIF3H	O15372	352 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	TTI1	O43156	1089 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	DAPK3	O43293	454 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	FAM189A1	O60320	539 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	PEX10	O60683	326 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	GPR37L1	O60883	481 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	TJP3	O95049	919 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	VNN1	O95497	513 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	TXN	P10599	105 aa	Known RBP	12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	ACOT2	P49753	483 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	IRAK1	P51617	712 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	TLE2	Q04725	743 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	DHX9	Q08211	1270 aa	Known RBP	12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	PLCB4	Q15147	1175 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	ATF7IP2	Q5U623	682 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	DCAF12L1	Q5VU92	463 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	C1orf53	Q5VUE5	145 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	ZNF410	Q86VK4	478 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	PRELID2	Q8N945	189 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	TTC13	Q8NBP0	860 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	PPTC7	Q8NI37	304 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	FEZF2	Q8TBJ5	459 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	AFG1L	Q8WV93	481 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	ZNF606	Q8WXB4	792 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	SH2D3A	Q9BRG2	576 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	RPF1	Q9H9Y2	349 aa	Known RBP	12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	PLEKHA5	Q9HAU0	1116 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	ZDHHC18	Q9NUE0	388 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	PLAA	Q9Y263	795 aa		12.52	□□□□□ -0.41
LETMD1-223	ENST00000550442	RRN3P2	A6NIE6	340 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	EBAG9	O00559	213 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	ZNF189	O75820	626 aa	Predicted RBP	12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	TMEM191B	P0C7N4	346 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	PYGM	P11217	842 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	DES	P17661	470 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	NR1D1	P20393	614 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	ADCYAP1R1	P41586	468 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	PTGIR	P43119	386 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	RNASE9	P60153	205 aa	Known RBP	12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	SP4	Q02446	784 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	IFFO1	Q0D2I5	559 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	MAMLD1	Q13495	774 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	ADGRE1	Q14246	886 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	SGO2	Q562F6	1265 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	WDR78	Q5VTH9	848 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	DENND2C	Q68D51	928 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	TMEM270	Q6UE05	265 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	RNF149	Q8NC42	400 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	TSEN2	Q8NCE0	465 aa	Known RBP	12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	PIK3R5	Q8WYR1	880 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	KAT5	Q92993	513 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	ART4	Q93070	314 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	CCDC77	Q9BR77	488 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	INO80B	Q9C086	356 aa	Predicted RBP	12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	SMARCAL1	Q9NZC9	954 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	FLRT1	Q9NZU1	646 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	ANKFY1	Q9P2R3	1169 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	DRG1	Q9Y295	367 aa	Known RBP	12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	C2CD2	Q9Y426	696 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	NFS1	Q9Y697	457 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	IVNS1ABP	Q9Y6Y0	642 aa		12.51	□□□□□ -0.41
LETMD1-223	ENST00000550442	SLC15A5	A6NIM6	579 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	KIAA0355	O15063	1070 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	TCEA3	O75764	348 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	AGT	P01019	485 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	KRT7	P08729	469 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	HOXD8	P13378	290 aa	Predicted RBP	12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	ITGA4	P13612	1032 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	ITGB8	P26012	769 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	GUCY2F	P51841	1108 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	PMS2	P54278	862 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	HNRNPH2	P55795	449 aa	Known RBP	12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	PTK6	Q13882	451 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	ZNF268	Q14587	947 aa	Predicted RBP	12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	PPP1R7	Q15435	360 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442		Q3C1V9	767 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	ODF2	Q5BJF6	829 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	CEP85L	Q5SZL2	805 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	IQSEC1	Q6DN90	963 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	TAOK1	Q7L7X3	1001 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	PCGF5	Q86SE9	256 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	VSIG1	Q86XK7	387 aa		12.5	□□□□□ -0.41
LETMD1-223	ENST00000550442	ZSWIM2	Q8NEG5	633 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms