RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 PTPRDP23468 1912 aa8.19□□□□□ -1.1
RNF41-208ENST00000550379 TMEM265A0A087WTH1 108 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 H7C4K7 107 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 PJA2O43164 708 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 CYP26A1O43174 497 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 NDUFA10O95299 355 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 ITGB1P05556 798 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 WEE2P0C1S8 567 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 SKILP12757 684 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 UNGP13051 313 aaPredicted RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 CHRNB2P17787 502 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 CYLC1P35663 651 aaPredicted RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 MAGEA11P43364 429 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 PDE6CP51160 858 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 NDST1P52848 882 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 HADHBP55084 474 aaKnown RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 ERVK-21P61565 698 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 KRT83P78385 493 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 SMAD3P84022 425 aaKnown RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 CENPCQ03188 943 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 YWHAHQ04917 246 aaPredicted RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 RAB30Q15771 203 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 ASIC2Q16515 512 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 NFE2Q16621 373 aaPredicted RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 KIAA0319Q5VV43 1072 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 WSCD1Q658N2 575 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 TPGS2Q68CL5 300 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 TMEM270Q6UE05 265 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 ZNF571Q7Z3V5 609 aaPredicted RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 METTL23Q86XA0 190 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 PHF13Q86YI8 300 aaPredicted RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 THEM5Q8N1Q8 247 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 ANKRD52Q8NB46 1076 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 SPC24Q8NBT2 197 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 MYCBPAPQ8TBZ2 947 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 FAM84AQ96KN4 292 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 HSFY1Q96LI6 401 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 CCDC42Q96M95 316 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 MMS19Q96T76 1030 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 CHP1Q99653 195 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 RTP3Q9BQQ7 232 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 HERC2P3Q9BVR0 1158 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 GPR62Q9BZJ7 368 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 ELOVL4Q9GZR5 314 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 MIS12Q9H081 205 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 LMAN2LQ9H0V9 348 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 HAUS4Q9H6D7 363 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 SMYD3Q9H7B4 428 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 NHEJ1Q9H9Q4 299 aaPredicted RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 CSNK1G1Q9HCP0 422 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 LUC7LQ9NQ29 371 aaKnown RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 MTRRQ9UBK8 725 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 NXF1Q9UBU9 619 aaKnown RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 NAGPAQ9UK23 515 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 ZMYND8Q9ULU4 1186 aaPredicted RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.18□□□□□ -1.1
RNF41-208ENST00000550379 PCDHB4Q9Y5E5 795 aa8.18□□□□□ -1.1
RNF41-208ENST00000550379 MRPL42Q9Y6G3 142 aaKnown RBP8.18□□□□□ -1.1
RNF41-208ENST00000550379 A0A0A6YYK5 440 aaPredicted RBP8.17□□□□□ -1.1
RNF41-208ENST00000550379 GOLGA6L9A6NEM1 432 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 DDX3XO00571 662 aaKnown RBP eCLIP8.17□□□□□ -1.1
RNF41-208ENST00000550379 TLL1O43897 1013 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 TADA2AO75478 443 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 TUBB4AP04350 444 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 CTSAP10619 480 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 SYN1P17600 705 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 PTPN1P18031 435 aaKnown RBP8.17□□□□□ -1.1
RNF41-208ENST00000550379 GNA15P30679 374 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 GPD2P43304 727 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 GABRB2P47870 512 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 OR1G1P47890 313 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 CDH8P55286 799 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 SNX16P57768 344 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 FMO1Q01740 532 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 KRT17Q04695 432 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 LRMPQ12912 555 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 GPR17Q13304 367 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 SHHQ15465 462 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 ARHGAP44Q17R89 818 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 LRIT3Q3SXY7 679 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 SGO2Q562F6 1265 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 INTS6LQ5JSJ4 861 aaKnown RBP8.17□□□□□ -1.1
RNF41-208ENST00000550379 OVOS1Q6IE37 1185 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 VSTM1Q6UX27 236 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 DSTYKQ6XUX3 929 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 BEND5Q7L4P6 421 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 TMEM110Q86TL2 294 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 NOP9Q86U38 636 aaKnown RBP8.17□□□□□ -1.1
RNF41-208ENST00000550379 SLC47A2Q86VL8 602 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 ZNF276Q8N554 614 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 B3GALNT2Q8NCR0 500 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 LNX1Q8TBB1 728 aaPredicted RBP8.17□□□□□ -1.1
RNF41-208ENST00000550379 KIAA1524Q8TCG1 905 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 SLC35F5Q8WV83 523 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 CPLX3Q8WVH0 158 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 KCTD13Q8WZ19 329 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 TMEM169Q96HH4 297 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 AGPAT1Q99943 283 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 ZSWIM1Q9BR11 485 aa8.17□□□□□ -1.1
RNF41-208ENST00000550379 MRPL45Q9BRJ2 306 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms