RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ABI2Q9NYB9 513 aaPredicted RBP17.16■□□□□ 0.34
COX6A1-203ENST00000550009 SPTBN4Q9H254 2564 aa17.16■□□□□ 0.34
COX6A1-203ENST00000550009 ZNF292O60281 2723 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 HEPACAM2A8MVW5 462 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 ATP2C2O75185 946 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 PRAMEF12O95522 483 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 KRT19P08727 400 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 GABRR2P28476 465 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 HOXC13P31276 330 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 ABCD1P33897 745 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 ALDH1A3P47895 512 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 SOX9P48436 509 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 EPHB3P54753 998 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 PLD1Q13393 1074 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 RESP18Q5W5W9 173 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 ZNF687Q8N1G0 1237 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 GPD1LQ8N335 351 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 SCFD1Q8WVM8 642 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 PSMG2Q969U7 264 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 C7orf25Q9BPX7 421 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 PI4K2AQ9BTU6 479 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 GZF1Q9H116 711 aaPredicted RBP17.15■□□□□ 0.34
COX6A1-203ENST00000550009 SLC39A2Q9NP94 309 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 HSPBP1Q9NZL4 362 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 SERTAD1Q9UHV2 236 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 NME7Q9Y5B8 376 aa17.15■□□□□ 0.34
COX6A1-203ENST00000550009 ARNTLO00327 626 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 MICAL2O94851 1124 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 HSP90AA1P07900 732 aaKnown RBP17.14■□□□□ 0.33
COX6A1-203ENST00000550009 HAPLN1P10915 354 aaPredicted RBP17.14■□□□□ 0.33
COX6A1-203ENST00000550009 ME1P48163 572 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 SV2CQ496J9 727 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 FAM26FQ5R3K3 315 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 TSSK4Q6SA08 328 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 TMEM150AQ86TG1 271 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 C1orf210Q8IVY1 113 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 RIN3Q8TB24 985 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 ZNF507Q8TCN5 953 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 PKMYT1Q99640 499 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 TRMT61BQ9BVS5 477 aaKnown RBP17.14■□□□□ 0.33
COX6A1-203ENST00000550009 ATXN3LQ9H3M9 355 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 BRD9Q9H8M2 597 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 MAFFQ9ULX9 164 aa17.14■□□□□ 0.33
COX6A1-203ENST00000550009 NDRG2Q9UN36 371 aaKnown RBP17.14■□□□□ 0.33
COX6A1-203ENST00000550009 KLRC4O43908 158 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 SP9P0CG40 484 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 CYP2F1P24903 491 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 LMO2P25791 158 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 CYP2J2P51589 502 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
COX6A1-203ENST00000550009 PRKCQQ04759 706 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 SOWAHAQ2M3V2 549 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 GPR158Q5T848 1215 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 METTL23Q86XA0 190 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 ARID3BQ8IVW6 561 aaPredicted RBP17.13■□□□□ 0.33
COX6A1-203ENST00000550009 IQUBQ8NA54 791 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 FAM200AQ8TCP9 573 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 PLEKHO2Q8TD55 490 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 ZNF516Q92618 1163 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 OXCT2Q9BYC2 517 aaPredicted RBP17.13■□□□□ 0.33
COX6A1-203ENST00000550009 AGPAT3Q9NRZ7 376 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 INTS13Q9NVM9 706 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 GTF3C4Q9UKN8 822 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 SNX9Q9Y5X1 595 aa17.13■□□□□ 0.33
COX6A1-203ENST00000550009 EML5Q05BV3 1969 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 A0A1B0GVL5 298 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 ACTN4O43707 911 aaKnown RBP17.12■□□□□ 0.33
COX6A1-203ENST00000550009 CST3P01034 146 aaPredicted RBP17.12■□□□□ 0.33
COX6A1-203ENST00000550009 HMGA1P17096 107 aaKnown RBP17.12■□□□□ 0.33
COX6A1-203ENST00000550009 PSMC3P17980 439 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 CASP4P49662 377 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 ALCAMQ13740 583 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 DDR2Q16832 855 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 CNNM4Q6P4Q7 775 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 UNC13DQ70J99 1090 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 THEM5Q8N1Q8 247 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 KBTBD7Q8WVZ9 684 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 ZNF560Q96MR9 790 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 SLC46A2Q9BY10 475 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 TMEM206Q9H813 350 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 TRPV4Q9HBA0 871 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 DDX43Q9NXZ2 648 aaKnown RBP17.12■□□□□ 0.33
COX6A1-203ENST00000550009 RCOR1Q9UKL0 485 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 DSEQ9UL01 958 aa17.12■□□□□ 0.33
COX6A1-203ENST00000550009 EP300Q09472 2414 aaPredicted RBP17.12■□□□□ 0.33
COX6A1-203ENST00000550009 MYBPHLA2RUH7 354 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 TADA3O75528 432 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 LDHAP00338 332 aaKnown RBP17.11■□□□□ 0.33
COX6A1-203ENST00000550009 TMEM191BP0C7N4 346 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 PSMC1P62191 440 aaKnown RBP17.11■□□□□ 0.33
COX6A1-203ENST00000550009 PFKPQ01813 784 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 TNK2Q07912 1038 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 TXNDC11Q6PKC3 985 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 NT5DC4Q86YG4 428 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 MFSD6LQ8IWD5 586 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 KCNG4Q8TDN1 519 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 SHDQ96IW2 340 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 IRF2BPLQ9H1B7 796 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 CUEDC2Q9H467 287 aa17.11■□□□□ 0.33
COX6A1-203ENST00000550009 RBM12Q9NTZ6 932 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms