RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 AKAP5P24588 427 aa15.75■□□□□ 0.11
CUX1-214ENST00000550008 RPL21P46778 160 aaKnown RBP15.75■□□□□ 0.11
CUX1-214ENST00000550008 OTUD4Q01804 1114 aaKnown RBP15.75■□□□□ 0.11
CUX1-214ENST00000550008 TREML2Q5T2D2 321 aa15.75■□□□□ 0.11
CUX1-214ENST00000550008 TRIM55Q9BYV6 548 aa15.75■□□□□ 0.11
CUX1-214ENST00000550008 WRAP73Q9P2S5 460 aaPredicted RBP15.75■□□□□ 0.11
CUX1-214ENST00000550008 SAE1Q9UBE0 346 aaPredicted RBP15.75■□□□□ 0.11
CUX1-214ENST00000550008 CPSF3Q9UKF6 684 aaKnown RBP15.75■□□□□ 0.11
CUX1-214ENST00000550008 GPC4O75487 556 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
CUX1-214ENST00000550008 GPD1P21695 349 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 PLCB4Q15147 1175 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 PTGISQ16647 500 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 ZCWPW2Q504Y3 356 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 MYLK4Q86YV6 388 aaPredicted RBP15.74■□□□□ 0.11
CUX1-214ENST00000550008 ACTL9Q8TC94 416 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 SEMA4DQ92854 862 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 GNL1P36915 607 aaPredicted RBP15.74■□□□□ 0.11
CUX1-214ENST00000550008 BZW1Q7L1Q6 419 aaKnown RBP15.74■□□□□ 0.11
CUX1-214ENST00000550008 ACTR5Q9H9F9 607 aaPredicted RBP15.74■□□□□ 0.11
CUX1-214ENST00000550008 ZC3H7BQ9UGR2 993 aaKnown RBP15.74■□□□□ 0.11
CUX1-214ENST00000550008 FNTAP49354 379 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 SIAH1Q8IUQ4 282 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 AENQ8WTP8 325 aaKnown RBP15.74■□□□□ 0.11
CUX1-214ENST00000550008 DDX23Q9BUQ8 820 aaKnown RBP15.74■□□□□ 0.11
CUX1-214ENST00000550008 HES2Q9Y543 173 aa15.74■□□□□ 0.11
CUX1-214ENST00000550008 TIMM13Q9Y5L4 95 aaPredicted RBP15.74■□□□□ 0.11
CUX1-214ENST00000550008 CFAP69A5D8W1 941 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 F8VP50 259 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 RPS6KA5O75582 802 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 CTCFP49711 727 aaPredicted RBP15.73■□□□□ 0.11
CUX1-214ENST00000550008 LMNTD2Q8IXW0 634 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 PDCD6IPQ8WUM4 868 aaKnown RBP15.73■□□□□ 0.11
CUX1-214ENST00000550008 BSNDQ8WZ55 320 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 ALG3Q92685 438 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 WNK4Q96J92 1243 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 SEC16BQ96JE7 1060 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 LRRC37BQ96QE4 947 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 TTYH3Q9C0H2 523 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 COL14A1Q05707 1796 aaKnown RBP15.73■□□□□ 0.11
CUX1-214ENST00000550008 MAP2K7O14733 419 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 TBC1D12O60347 775 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 YY1P25490 414 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 SERPINB6P35237 376 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 PTGER2P43116 358 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 TSPY1Q01534 308 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 PTPN11Q06124 597 aaPredicted RBP15.73■□□□□ 0.11
CUX1-214ENST00000550008 DNAJC3Q13217 504 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 MFSD7Q6UXD7 560 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 FAM131BQ86XD5 332 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 GPC2Q8N158 579 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 REPS2Q8NFH8 660 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 HASPINQ8TF76 798 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 SNTG2Q9NY99 539 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 ADAMTSL3P82987 1691 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 DFFAO00273 331 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 PDHXO00330 501 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 MAPTP10636 758 aaKnown RBP15.73■□□□□ 0.11
CUX1-214ENST00000550008 ADORA2AP29274 412 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 AFAP1L2Q8N4X5 818 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 SKA2Q8WVK7 121 aaPredicted RBP15.73■□□□□ 0.11
CUX1-214ENST00000550008 HDAC11Q96DB2 347 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 ROBO1Q9Y6N7 1651 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 CFLARO15519 480 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 PIAS1O75925 651 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 SLC7A14Q8TBB6 771 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 KCNV2Q8TDN2 545 aa15.73■□□□□ 0.11
CUX1-214ENST00000550008 SLIT2O94813 1529 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 B4GALT5O43286 388 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 ZC3H11AO75152 810 aaKnown RBP eCLIP15.72■□□□□ 0.113e-6■■■■□ 25.7
CUX1-214ENST00000550008 HMBSP08397 361 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 ZSCAN5DPP0CG00 497 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 NOTUMQ6P988 496 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 RNF135Q8IUD6 432 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 KIF2BQ8N4N8 673 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 CYTH2Q99418 400 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 FHDC1Q9C0D6 1143 aaPredicted RBP15.72■□□□□ 0.11
CUX1-214ENST00000550008 PORCNQ9H237 461 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 MROH8Q9H579 483 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 BFARQ9NZS9 450 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 TYK2P29597 1187 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 GCNT1Q02742 428 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 HSDL1Q3SXM5 330 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 MDH1BQ5I0G3 518 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 LRRC34Q8IZ02 419 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 THEM5Q8N1Q8 247 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 MYCBPAPQ8TBZ2 947 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 RAPGEF5Q92565 580 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 LENG9Q96B70 501 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 SPON2Q9BUD6 331 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 FSD1LQ9BXM9 530 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 SLC12A6Q9UHW9 1150 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 PRG3Q9Y2Y8 225 aaPredicted RBP15.72■□□□□ 0.11
CUX1-214ENST00000550008 TGFB3P10600 412 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 HSD17B4P51659 736 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 IFI35P80217 286 aaPredicted RBP15.72■□□□□ 0.11
CUX1-214ENST00000550008 TDRD10Q5VZ19 366 aaKnown RBP15.72■□□□□ 0.11
CUX1-214ENST00000550008 WDR49Q8IV35 697 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 NUDCD3Q8IVD9 361 aa15.72■□□□□ 0.11
CUX1-214ENST00000550008 CDKL3Q8IVW4 592 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms