RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 NOP14P78316 857 aaKnown RBP12.75□□□□□ -0.37
PFDN5-208ENST00000549995 CFAP221Q4G0U5 840 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 CCDC40Q4G0X9 1142 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 LIN9Q5TKA1 542 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 CDKAL1Q5VV42 579 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 SASS6Q6UVJ0 657 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 RNF19BQ6ZMZ0 732 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 LRRTM3Q86VH5 581 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 GLYCTKQ8IVS8 523 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 DCP1BQ8IZD4 617 aaKnown RBP12.75□□□□□ -0.37
PFDN5-208ENST00000549995 LMO3Q8TAP4 145 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 SPPL2BQ8TCT7 592 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 SEMA4DQ92854 862 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 FUBP3Q96I24 572 aaKnown RBP eCLIP12.75□□□□□ -0.37
PFDN5-208ENST00000549995 CNOT6LQ96LI5 555 aaKnown RBP12.75□□□□□ -0.37
PFDN5-208ENST00000549995 TMEM209Q96SK2 561 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 BPIFA3Q9BQP9 254 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 MRPL45Q9BRJ2 306 aaKnown RBP12.75□□□□□ -0.37
PFDN5-208ENST00000549995 NIF3L1Q9GZT8 377 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 SDCBP2Q9H190 292 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 CRISPLD1Q9H336 500 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 CYP3A43Q9HB55 503 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 ABCB6Q9NP58 842 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 TCF20Q9UGU0 1960 aaKnown RBP12.75□□□□□ -0.37
PFDN5-208ENST00000549995 CDH9Q9ULB4 789 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 INSL5Q9Y5Q6 135 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 C5orf42Q9H799 3197 aa12.75□□□□□ -0.37
PFDN5-208ENST00000549995 TTC28Q96AY4 2481 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 DOCK6Q96HP0 2047 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 NUP210Q8TEM1 1887 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-208ENST00000549995 GTPBP10A4D1E9 387 aaKnown RBP12.74□□□□□ -0.37
PFDN5-208ENST00000549995 RFPL2O75678 378 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 OR4Q2P0C623 313 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 P4HA1P13674 534 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 IL9P15248 144 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 EPHA5P54756 1037 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 TYRO3Q06418 890 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 CBX2Q14781 532 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-208ENST00000549995 NFE2Q16621 373 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-208ENST00000549995 SKOR2Q2VWA4 1001 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-208ENST00000549995 DCAF17Q5H9S7 520 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-208ENST00000549995 RARS2Q5T160 578 aaKnown RBP12.74□□□□□ -0.37
PFDN5-208ENST00000549995 CES5AQ6NT32 575 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 CAVIN1Q6NZI2 390 aaKnown RBP12.74□□□□□ -0.37
PFDN5-208ENST00000549995 C11orf57Q6ZUT1 292 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-208ENST00000549995 UNC93AQ86WB7 457 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 TTC39CQ8N584 583 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 UBR7Q8N806 425 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 SLC7A14Q8TBB6 771 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 FEZF2Q8TBJ5 459 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 RIPOR3Q96MK2 946 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 IMPG2Q9BZV3 1241 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 POLIQ9UNA4 740 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 YIPF1Q9Y548 306 aa12.74□□□□□ -0.37
PFDN5-208ENST00000549995 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 LRRN2O75325 713 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 AFPP02771 609 aaKnown RBP12.73□□□□□ -0.37
PFDN5-208ENST00000549995 SPATA31D3P0C874 917 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 EEF1GP26641 437 aaKnown RBP12.73□□□□□ -0.37
PFDN5-208ENST00000549995 MAGEA11P43364 429 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 TSPY1Q01534 308 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 ADCY1Q08828 1119 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 KCNH2Q12809 1159 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 PLD1Q13393 1074 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 SLC39A12Q504Y0 691 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 PPM1LQ5SGD2 360 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 TCERG1LQ5VWI1 586 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 SPOPLQ6IQ16 392 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 SPATA31D4Q6ZUB0 917 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 FAM114A1Q8IWE2 563 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 C12orf76Q8N812 135 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-208ENST00000549995 MYCBPAPQ8TBZ2 947 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 CEP295NLQ96MC4 621 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 PHF7Q9BWX1 381 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-208ENST00000549995 WDR6Q9NNW5 1121 aaKnown RBP12.73□□□□□ -0.37
PFDN5-208ENST00000549995 CRTAC1Q9NQ79 661 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 TMLHEQ9NVH6 421 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 USTQ9Y2C2 406 aa12.73□□□□□ -0.37
PFDN5-208ENST00000549995 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.73□□□□□ -0.37
PFDN5-208ENST00000549995 KIF26AQ9ULI4 1882 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-208ENST00000549995 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
PFDN5-208ENST00000549995 CLUHO75153 1309 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 LOC730098B7Z3J9 87 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 HCRTO43612 131 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 XYLBO75191 536 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 CILPO75339 1184 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 MICAL2O94851 1124 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 HAPLN1P10915 354 aaPredicted RBP12.72□□□□□ -0.37
PFDN5-208ENST00000549995 ZNF18P17022 549 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 LMO2P25791 158 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 ZP2Q05996 745 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 NCAPHQ15003 741 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 MAPRE1Q15691 268 aaKnown RBP12.72□□□□□ -0.37
PFDN5-208ENST00000549995 CLUL1Q15846 466 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 MAN2A1Q16706 1144 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 MIIPQ5JXC2 388 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
PFDN5-208ENST00000549995 TMC5Q6UXY8 1006 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms