RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 ARHGAP44Q17R89 818 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 CTXN3Q4LDR2 81 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 SFMBT2Q5VUG0 894 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 WSCD1Q658N2 575 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 TPGS2Q68CL5 300 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 FAM109BQ6ICB4 259 aaPredicted RBP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 IQCEQ6IPM2 695 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 RRAGAQ7L523 313 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 TMC6Q7Z403 805 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 ARHGEF19Q8IW93 802 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 CRYBG2Q8N1P7 616 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 POF1BQ8WVV4 589 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 TATDN2Q93075 761 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 TMEM176AQ96HP8 235 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 FUBP3Q96I24 572 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 CEP295NLQ96MC4 621 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 CDCA3Q99618 268 aaPredicted RBP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 C17orf80Q9BSJ5 609 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 GPR62Q9BZJ7 368 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 TTYH3Q9C0H2 523 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 SMYD3Q9H7B4 428 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 DDX43Q9NXZ2 648 aaKnown RBP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 MTRRQ9UBK8 725 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 POLIQ9UNA4 740 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 COLQQ9Y215 455 aaPredicted RBP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 STXBP5LQ9Y2K9 1186 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 FHOD1Q9Y613 1164 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 MYH10P35580 1976 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 RANBP2P49792 3224 aaKnown RBP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 GFPT2O94808 682 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 NOL4O94818 638 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 WEE2P0C1S8 567 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 SRGAP2BP0DMP2 458 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 VDRP11473 427 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 CD58P19256 250 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 KRT9P35527 623 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 PBX3P40426 434 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 USP8P40818 1118 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 NDST1P52848 882 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 JAM2P57087 298 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 SNX16P57768 344 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 ASIC2Q16515 512 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 SGO2Q562F6 1265 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 INTS6LQ5JSJ4 861 aaKnown RBP10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 ZNF697Q5TEC3 545 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 SLC8B1Q6J4K2 584 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 TMEM270Q6UE05 265 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 CD300LGQ6UXG3 332 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 TRIM72Q6ZMU5 477 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 FAM71AQ8IYT1 594 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 RBBP8NLQ8NC74 664 aaPredicted RBP10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 B3GALNT2Q8NCR0 500 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 MSANTD4Q8NCY6 345 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 OR8K1Q8NGG5 319 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 SPPL3Q8TCT6 385 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 SPPL2BQ8TCT7 592 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 ARNTL2Q8WYA1 636 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 RIN2Q8WYP3 895 aaPredicted RBP10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 KREMEN1Q96MU8 473 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 TCF25Q9BQ70 676 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 SYT15Q9BQS2 421 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 MIS12Q9H081 205 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 ZNF576Q9H609 170 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 RXFP1Q9HBX9 757 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 ABCB6Q9NP58 842 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 NLRC4Q9NPP4 1024 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 AIPL1Q9NZN9 384 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 HCSTQ9UBK5 93 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 CACNG4Q9UBN1 327 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 HESX1Q9UBX0 185 aa10.4□□□□□ -0.74
SMARCD1-206ENST00000549274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 NCK2O43639 380 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 MFAP3LO75121 409 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 CXCL14O95715 111 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 GYPCP04921 128 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 CHRM1P11229 460 aaPredicted RBP10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 CPB1P15086 417 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 MYOGP15173 224 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 GNA15P30679 374 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 ELF1P32519 619 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 CA8P35219 290 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 PBX2P40425 430 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 ZNF132P52740 706 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 CCDC173Q0VFZ6 552 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 PLD1Q13393 1074 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 ARID5BQ14865 1188 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 KIAA0319Q5VV43 1072 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 TMEM173Q86WV6 379 aaPredicted RBP10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 UBR7Q8N806 425 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 MRPL43Q8N983 215 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 CCDC112Q8NEF3 446 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 MICAL1Q8TDZ2 1067 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 HDAC7Q8WUI4 952 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 BCL7CQ8WUZ0 217 aaPredicted RBP10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 KBTBD7Q8WVZ9 684 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 RABGGTAQ92696 567 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 MRPL38Q96DV4 380 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 HEXIM2Q96MH2 286 aaKnown RBP10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 PANX2Q96RD6 677 aa10.39□□□□□ -0.75
SMARCD1-206ENST00000549274 MRPL45Q9BRJ2 306 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms