RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 STXBP5LQ9Y2K9 1186 aa13.03□□□□□ -0.32
ERBB3-208ENST00000549205 THAP12O43422 761 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 HCRTO43612 131 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 EFEMP2O95967 443 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 LMO2P25791 158 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 TKTP29401 623 aaKnown RBP13.02□□□□□ -0.33
ERBB3-208ENST00000549205 CYLC1P35663 651 aaPredicted RBP13.02□□□□□ -0.33
ERBB3-208ENST00000549205 PPM1AP35813 382 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 KIF11P52732 1056 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 CDR2Q01850 454 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 ORC1Q13415 861 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 BMS1Q14692 1282 aaKnown RBP13.02□□□□□ -0.33
ERBB3-208ENST00000549205 MTF1Q14872 753 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 FAM171A1Q5VUB5 890 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 TAF3Q5VWG9 929 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 OVOS1Q6IE37 1185 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.02□□□□□ -0.33
ERBB3-208ENST00000549205 VPS36Q86VN1 386 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 CRYBG2Q8N1P7 616 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 UBE2OQ9C0C9 1292 aaKnown RBP13.02□□□□□ -0.33
ERBB3-208ENST00000549205 AAASQ9NRG9 546 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 SPG21Q9NZD8 308 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 PUF60Q9UHX1 559 aaKnown RBP13.02□□□□□ -0.33
ERBB3-208ENST00000549205 KIAA1257Q9ULG3 409 aa13.02□□□□□ -0.33
ERBB3-208ENST00000549205 EPN1Q9Y6I3 576 aaPredicted RBP13.02□□□□□ -0.33
ERBB3-208ENST00000549205 LCHNA4D1U4 455 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 EIF3CLB5ME19 914 aaKnown RBP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 AKR1B10O60218 316 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 OAZ2O95190 189 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 NDUFA10O95299 355 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 LCA5LO95447 670 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 MMEP08473 750 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 PDGFRBP09619 1106 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 LINC00271P0C7V0 271 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 VDRP11473 427 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 CD19P15391 556 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 TNFAIP3P21580 790 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 FGFR3P22607 806 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 BRD2P25440 801 aaKnown RBP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 PCSK1P29120 753 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 RGS19P49795 217 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 FMO1Q01740 532 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 YWHAHQ04917 246 aaPredicted RBP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 SGO2Q562F6 1265 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 ACOT1Q86TX2 421 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 RNF168Q8IYW5 571 aaPredicted RBP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 THEM5Q8N1Q8 247 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 SLC30A5Q8TAD4 765 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 LNX1Q8TBB1 728 aaPredicted RBP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 ZNF606Q8WXB4 792 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 TFAP2BQ92481 460 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 TMEM169Q96HH4 297 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 TNIP3Q96KP6 325 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 HEXIM2Q96MH2 286 aaKnown RBP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 EIF3CQ99613 913 aaKnown RBP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 ZSWIM1Q9BR11 485 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 VN1R3Q9BXE9 311 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 DPEP3Q9H4B8 488 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 DDX43Q9NXZ2 648 aaKnown RBP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 ADAMTS1Q9UHI8 967 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 PYCARDQ9ULZ3 195 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 PCDHB12Q9Y5F1 795 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 PATJQ8NI35 1801 aa13.01□□□□□ -0.33
ERBB3-208ENST00000549205 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
ERBB3-208ENST00000549205 MTCL1Q9Y4B5 1905 aaKnown RBP13□□□□□ -0.33
ERBB3-208ENST00000549205 A0A087X0T9 212 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 DDX3XO00571 662 aaKnown RBP eCLIP13□□□□□ -0.33
ERBB3-208ENST00000549205 MED7O43513 233 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 FAM228BP0C875 321 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 PTPN1P18031 435 aaKnown RBP13□□□□□ -0.33
ERBB3-208ENST00000549205 ACAT1P24752 427 aaKnown RBP13□□□□□ -0.33
ERBB3-208ENST00000549205 RABGGTBP53611 331 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 GFPT1Q06210 699 aaPredicted RBP13□□□□□ -0.33
ERBB3-208ENST00000549205 MRPL58Q14197 206 aaKnown RBP13□□□□□ -0.33
ERBB3-208ENST00000549205 STILQ15468 1287 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 SLC18A3Q16572 532 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 USP41Q3LFD5 358 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
ERBB3-208ENST00000549205 FAM109BQ6ICB4 259 aaPredicted RBP13□□□□□ -0.33
ERBB3-208ENST00000549205 TOGARAM2Q6ZUX3 1019 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 B3GALNT2Q8NCR0 500 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 SYT15Q9BQS2 421 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 ACBD6Q9BR61 282 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 SPTLC3Q9NUV7 552 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 SEPT11Q9NVA2 429 aaKnown RBP13□□□□□ -0.33
ERBB3-208ENST00000549205 CDH9Q9ULB4 789 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 NENFQ9UMX5 172 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 ATG2AQ2TAZ0 1938 aa13□□□□□ -0.33
ERBB3-208ENST00000549205 O00370 1275 aa12.99□□□□□ -0.33
ERBB3-208ENST00000549205 ZNF263O14978 683 aa12.99□□□□□ -0.33
ERBB3-208ENST00000549205 ATP2C2O75185 946 aa12.99□□□□□ -0.33
ERBB3-208ENST00000549205 IPO7O95373 1038 aaKnown RBP12.99□□□□□ -0.33
ERBB3-208ENST00000549205 SOD2P04179 222 aa12.99□□□□□ -0.33
ERBB3-208ENST00000549205 CFHP08603 1231 aa12.99□□□□□ -0.33
ERBB3-208ENST00000549205 PSMC1P62191 440 aaKnown RBP12.99□□□□□ -0.33
ERBB3-208ENST00000549205 TSPY1Q01534 308 aa12.99□□□□□ -0.33
ERBB3-208ENST00000549205 SPA17Q15506 151 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms