RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 PTPAQ15257 358 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
PTCH1-218ENST00000548945 ADALQ6DHV7 355 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 TXNDC11Q6PKC3 985 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 LONP2Q86WA8 852 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 RASSF8Q8NHQ8 419 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 BPIFB1Q8TDL5 484 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 SEPT5Q99719 369 aaPredicted RBP13.89□□□□□ -0.19
PTCH1-218ENST00000548945 ZHX3Q9H4I2 956 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 IL21Q9HBE4 155 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 DPP3Q9NY33 737 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 AGO2Q9UKV8 859 aaKnown RBP13.89□□□□□ -0.19
PTCH1-218ENST00000548945 SMC3Q9UQE7 1217 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.89□□□□□ -0.19
PTCH1-218ENST00000548945 CEP295Q9C0D2 2601 aa13.89□□□□□ -0.19
PTCH1-218ENST00000548945 ANKRD63C9JTQ0 380 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 SOAT2O75908 522 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 PRAMEF12O95522 483 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 DDX6P26196 483 aaKnown RBP eCLIP13.88□□□□□ -0.19
PTCH1-218ENST00000548945 PNPLA4P41247 253 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 SOX9P48436 509 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 SIM2Q14190 667 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-218ENST00000548945 POSTNQ15063 836 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 ITPRIPL2Q3MIP1 535 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 MGAT5BQ3V5L5 792 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 WDR44Q5JSH3 913 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 PRR23BQ6ZRT6 265 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 ZNF720Q7Z2F6 126 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 DCP1BQ8IZD4 617 aaKnown RBP13.88□□□□□ -0.19
PTCH1-218ENST00000548945 KRI1Q8N9T8 703 aaKnown RBP13.88□□□□□ -0.19
PTCH1-218ENST00000548945 NETO1Q8TDF5 533 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 LPIN3Q9BQK8 851 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 PYM1Q9BRP8 204 aaKnown RBP13.88□□□□□ -0.19
PTCH1-218ENST00000548945 RBM12Q9NTZ6 932 aaKnown RBP13.88□□□□□ -0.19
PTCH1-218ENST00000548945 GTSE1Q9NYZ3 720 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 SEL1LQ9UBV2 794 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
PTCH1-218ENST00000548945 KPNA7A9QM74 516 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 CHURC1-FNTBB4DL54 471 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 HRO43593 1189 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 PPP1R37O75864 691 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 HAPLN1P10915 354 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-218ENST00000548945 FNTBP49356 437 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 SPEM2Q0P670 501 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 SF3A1Q15459 793 aaKnown RBP13.87□□□□□ -0.19
PTCH1-218ENST00000548945 TAF12Q16514 161 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 CSRP2Q16527 193 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 SV2CQ496J9 727 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 ZC2HC1CQ53FD0 456 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-218ENST00000548945 CRELD2Q6UXH1 353 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-218ENST00000548945 Q6ZS52 159 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 LRRTM3Q86VH5 581 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 WDR5BQ86VZ2 330 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 CMTM8Q8IZV2 173 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 ZFYVE19Q96K21 471 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 ZNF560Q96MR9 790 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 STRA6Q9BX79 667 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 SLC46A2Q9BY10 475 aa13.87□□□□□ -0.19
PTCH1-218ENST00000548945 ANAPC1Q9H1A4 1944 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 EML5Q05BV3 1969 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 CCDC163A0A0D9SF12 145 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 TISP43B9A030 160 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 SLC30A4O14863 429 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 CD2BP2O95400 341 aaKnown RBP13.86□□□□□ -0.19
PTCH1-218ENST00000548945 ADSSP30520 456 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 AVPR1AP37288 418 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 CYP4F8P98187 520 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 TSPY1Q01534 308 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 GRIN1Q05586 938 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 PON2Q15165 354 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 LPAL2Q16609 132 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 NFE2Q16621 373 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-218ENST00000548945 WSCD1Q658N2 575 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-218ENST00000548945 GPIHBP1Q8IV16 184 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 EFCAB13Q8IY85 973 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 LEO1Q8WVC0 666 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-218ENST00000548945 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 FAM83CQ9BQN1 747 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 KIF9Q9HAQ2 790 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 ABCB6Q9NP58 842 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 SEMA4GQ9NTN9 838 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 EXOC7Q9UPT5 735 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 PCDHB5Q9Y5E4 795 aa13.86□□□□□ -0.19
PTCH1-218ENST00000548945 F11P03951 625 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 CSH1P0DML2 217 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 CSH2P0DML3 217 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 HMGA1P17096 107 aaKnown RBP13.85□□□□□ -0.19
PTCH1-218ENST00000548945 GAP43P17677 238 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 NLRP12P59046 1061 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 AMPD2Q01433 879 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 TNK2Q07912 1038 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 DMWDQ09019 674 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 ZNF268Q14587 947 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-218ENST00000548945 TMEM196Q5HYL7 178 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 PRR23CQ6ZRP0 262 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 TMEM150AQ86TG1 271 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 SFR1Q86XK3 245 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 SPATA18Q8TC71 538 aa13.85□□□□□ -0.19
PTCH1-218ENST00000548945 GIPC2Q8TF65 315 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms