RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 DDX1Q92499 740 aaKnown RBP30.63■■■□□ 2.49
BRF1-213ENST00000548421 CLP1Q92989 425 aaKnown RBP30.63■■■□□ 2.49
BRF1-213ENST00000548421 TNIP3Q96KP6 325 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 KIAA1257Q9ULG3 409 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 AKR1B10O60218 316 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 PDGFRBP09619 1106 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 CD19P15391 556 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 TKTP29401 623 aaKnown RBP30.63■■■□□ 2.49
BRF1-213ENST00000548421 KIF11P52732 1056 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 YWHAHQ04917 246 aaPredicted RBP30.63■■■□□ 2.49
BRF1-213ENST00000548421 BMS1Q14692 1282 aaKnown RBP30.63■■■□□ 2.49
BRF1-213ENST00000548421 FAM171A1Q5VUB5 890 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 TAF3Q5VWG9 929 aa30.63■■■□□ 2.49
BRF1-213ENST00000548421 HEXIM2Q96MH2 286 aaKnown RBP30.63■■■□□ 2.49
BRF1-213ENST00000548421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP30.63■■■□□ 2.49
BRF1-213ENST00000548421 HCRTO43612 131 aa30.62■■■□□ 2.49
BRF1-213ENST00000548421 PPM1AP35813 382 aa30.62■■■□□ 2.49
BRF1-213ENST00000548421 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.62■■■□□ 2.49
BRF1-213ENST00000548421 ACOT1Q86TX2 421 aa30.62■■■□□ 2.49
BRF1-213ENST00000548421 CRYBG2Q8N1P7 616 aa30.62■■■□□ 2.49
BRF1-213ENST00000548421 ZNF606Q8WXB4 792 aa30.62■■■□□ 2.49
BRF1-213ENST00000548421 TMEM169Q96HH4 297 aa30.62■■■□□ 2.49
BRF1-213ENST00000548421 DPEP3Q9H4B8 488 aa30.62■■■□□ 2.49
BRF1-213ENST00000548421 SPG21Q9NZD8 308 aa30.62■■■□□ 2.49
BRF1-213ENST00000548421 PCDHB12Q9Y5F1 795 aa30.62■■■□□ 2.49
BRF1-213ENST00000548421 EPN1Q9Y6I3 576 aaPredicted RBP30.62■■■□□ 2.49
BRF1-213ENST00000548421 NDUFA10O95299 355 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 EFEMP2O95967 443 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 MMEP08473 750 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 LINC00271P0C7V0 271 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 VDRP11473 427 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 CHRNB2P17787 502 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 TNFAIP3P21580 790 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 FGFR3P22607 806 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 BRD2P25440 801 aaKnown RBP30.61■■■□□ 2.49
BRF1-213ENST00000548421 PCSK1P29120 753 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 SGO2Q562F6 1265 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 THEM5Q8N1Q8 247 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 OLIG1Q8TAK6 271 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 ADAMTS1Q9UHI8 967 aa30.61■■■□□ 2.49
BRF1-213ENST00000548421 LCHNA4D1U4 455 aa30.6■■■□□ 2.49
BRF1-213ENST00000548421 MED7O43513 233 aa30.6■■■□□ 2.49
BRF1-213ENST00000548421 FMO1Q01740 532 aa30.6■■■□□ 2.49
BRF1-213ENST00000548421 SLC18A3Q16572 532 aa30.6■■■□□ 2.49
BRF1-213ENST00000548421 GLYCTKQ8IVS8 523 aa30.6■■■□□ 2.49
BRF1-213ENST00000548421 TFAP2BQ92481 460 aa30.6■■■□□ 2.49
BRF1-213ENST00000548421 SEPT11Q9NVA2 429 aaKnown RBP30.6■■■□□ 2.49
BRF1-213ENST00000548421 CDH9Q9ULB4 789 aa30.6■■■□□ 2.49
BRF1-213ENST00000548421 OAZ2O95190 189 aa30.59■■■□□ 2.49
BRF1-213ENST00000548421 ACAT1P24752 427 aaKnown RBP30.59■■■□□ 2.49
BRF1-213ENST00000548421 RABGGTBP53611 331 aa30.59■■■□□ 2.49
BRF1-213ENST00000548421 CEP57Q86XR8 500 aa30.59■■■□□ 2.49
BRF1-213ENST00000548421 RNF168Q8IYW5 571 aaPredicted RBP30.59■■■□□ 2.49
BRF1-213ENST00000548421 B3GALNT2Q8NCR0 500 aa30.59■■■□□ 2.49
BRF1-213ENST00000548421 LNX1Q8TBB1 728 aaPredicted RBP30.59■■■□□ 2.49
BRF1-213ENST00000548421 RTP3Q9BQQ7 232 aa30.59■■■□□ 2.49
BRF1-213ENST00000548421 ZSWIM1Q9BR11 485 aa30.59■■■□□ 2.49
BRF1-213ENST00000548421 ACBD6Q9BR61 282 aa30.59■■■□□ 2.49
BRF1-213ENST00000548421 SPTLC3Q9NUV7 552 aa30.59■■■□□ 2.49
BRF1-213ENST00000548421 A0A087X0T9 212 aa30.58■■■□□ 2.49
BRF1-213ENST00000548421 EIF3CLB5ME19 914 aaKnown RBP30.58■■■□□ 2.49
BRF1-213ENST00000548421 DDX3XO00571 662 aaKnown RBP eCLIP30.58■■■□□ 2.49
BRF1-213ENST00000548421 FAM228BP0C875 321 aa30.58■■■□□ 2.49
BRF1-213ENST00000548421 GFPT1Q06210 699 aaPredicted RBP30.58■■■□□ 2.49
BRF1-213ENST00000548421 VARS2Q5ST30 1063 aaKnown RBP30.58■■■□□ 2.49
BRF1-213ENST00000548421 C12orf29Q8N999 325 aa30.58■■■□□ 2.49
BRF1-213ENST00000548421 SLC30A5Q8TAD4 765 aa30.58■■■□□ 2.49
BRF1-213ENST00000548421 EIF3CQ99613 913 aaKnown RBP30.58■■■□□ 2.49
BRF1-213ENST00000548421 SYT15Q9BQS2 421 aa30.58■■■□□ 2.49
BRF1-213ENST00000548421 TTPALQ9BTX7 342 aa30.58■■■□□ 2.49
BRF1-213ENST00000548421 PDCL3Q9H2J4 239 aa30.58■■■□□ 2.49
BRF1-213ENST00000548421 PYCARDQ9ULZ3 195 aa30.58■■■□□ 2.49
BRF1-213ENST00000548421 RANBP2P49792 3224 aaKnown RBP30.58■■■□□ 2.49
BRF1-213ENST00000548421 IPO7O95373 1038 aaKnown RBP30.57■■■□□ 2.48
BRF1-213ENST00000548421 LCA5LO95447 670 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 PSMC1P62191 440 aaKnown RBP30.57■■■□□ 2.48
BRF1-213ENST00000548421 STILQ15468 1287 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 USP41Q3LFD5 358 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 FAM109BQ6ICB4 259 aaPredicted RBP30.57■■■□□ 2.48
BRF1-213ENST00000548421 TOGARAM2Q6ZUX3 1019 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 VN1R3Q9BXE9 311 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 PCDHGC3Q9UN70 934 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 RWDD3Q9Y3V2 267 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 GRXCR1A8MXD5 290 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 PTPN1P18031 435 aaKnown RBP30.57■■■□□ 2.48
BRF1-213ENST00000548421 TRIM72Q6ZMU5 477 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 B3GALT6Q96L58 329 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 STK39Q9UEW8 545 aa30.57■■■□□ 2.48
BRF1-213ENST00000548421 LINC01553A4QN01 128 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 O00370 1275 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 SOD2P04179 222 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 MRPL58Q14197 206 aaKnown RBP30.56■■■□□ 2.48
BRF1-213ENST00000548421 SPA17Q15506 151 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 CNGA2Q16280 664 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 RTP2Q5QGT7 225 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 KIAA0319Q5VV43 1072 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 ARHGAP17Q68EM7 881 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 TAS1R1Q7RTX1 841 aa30.56■■■□□ 2.48
BRF1-213ENST00000548421 DDX53Q86TM3 631 aaKnown RBP30.56■■■□□ 2.48
BRF1-213ENST00000548421 FAM49BQ9NUQ9 324 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms