RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ZNF185O15231 689 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 ABCB4P21439 1286 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 TAP2Q03519 686 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 R3HDM1Q15032 1099 aaKnown RBP4.97□□□□□ -1.61
PTCH1-216ENST00000548379 SLC35G1Q2M3R5 365 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 AMOTQ4VCS5 1084 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 KLHDC7AQ5VTJ3 777 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 C1orf228Q6PIY5 440 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 CATSPERGQ6ZRH7 1159 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 TTLL10Q6ZVT0 673 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 SKAP1Q86WV1 359 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 GAS2L3Q86XJ1 694 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 SLC15A4Q8N697 577 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 TTC9BQ8N6N2 239 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 FAM46DQ8NEK8 389 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 ZNF483Q8TF39 744 aaPredicted RBP4.97□□□□□ -1.61
PTCH1-216ENST00000548379 C20orf173Q96LM9 149 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 MED15Q96RN5 788 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 PNKPQ96T60 521 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 XPNPEP3Q9NQH7 507 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 RAPGEFL1Q9UHV5 662 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 TMX2Q9Y320 296 aa4.97□□□□□ -1.61
PTCH1-216ENST00000548379 A0A1B0GTW7 788 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 MARCH11A6NNE9 402 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 AHRRA9YTQ3 701 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 DCLK1O15075 740 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 ELANEP08246 267 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 TXNP10599 105 aaKnown RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 CYP2C9P11712 490 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 HARSP12081 509 aaKnown RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 FGFR4P22455 802 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 HIBADHP31937 336 aaKnown RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 RNASE9P60153 205 aaKnown RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 OCA2Q04671 838 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 PIGFQ07326 219 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 CHAF1AQ13111 956 aaPredicted RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 STK3Q13188 491 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 DHX8Q14562 1220 aaKnown RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 RRP1BQ14684 758 aaKnown RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 MPEG1Q2M385 716 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 GRAMD1BQ3KR37 738 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 ARL13BQ3SXY8 428 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 PDCD4Q53EL6 469 aaKnown RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 TSHZ3Q63HK5 1081 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 TSHZ1Q6ZSZ6 1077 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 UNC13DQ70J99 1090 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 SDR16C5Q8N3Y7 309 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 CCDC33Q8N5R6 958 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 VGLL2Q8N8G2 317 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 IQCDQ96DY2 449 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 TTLL2Q9BWV7 592 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 REXO4Q9GZR2 422 aaKnown RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 VPS11Q9H270 941 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 RNPEPQ9H4A4 650 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 GOLGA2P5Q9HBQ8 144 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 ARFGAP3Q9NP61 516 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 CAPN11Q9UMQ6 739 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 ATP11BQ9Y2G3 1177 aa4.96□□□□□ -1.62
PTCH1-216ENST00000548379 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 WRNQ14191 1432 aaPredicted RBP eCLIP4.96□□□□□ -1.62
PTCH1-216ENST00000548379 CCDC195A0A1B0GUA6 201 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 POLRMTO00411 1230 aaKnown RBP4.95□□□□□ -1.62
PTCH1-216ENST00000548379 PLA2G6O60733 806 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 TCEA3O75764 348 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 SUN1O94901 812 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 A1BGP04217 495 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 ACRV1P26436 265 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 HSPA7P48741 367 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 CARSP49589 748 aaKnown RBP4.95□□□□□ -1.62
PTCH1-216ENST00000548379 ZNF844Q08AG5 666 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 TOB2Q14106 344 aaPredicted RBP4.95□□□□□ -1.62
PTCH1-216ENST00000548379 HS1BP3Q53T59 392 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 TAPT1Q6NXT6 567 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 TMPRSS6Q8IU80 811 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 PSD4Q8NDX1 1056 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 CYP2W1Q8TAV3 490 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 CXorf38Q8TB03 319 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 ZNF384Q8TF68 577 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 POF1BQ8WVV4 589 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 SPSB4Q96A44 273 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 TMEM41AQ96HV5 264 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 PHACTR3Q96KR7 559 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 TRIB1Q96RU8 372 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 SMOQ99835 787 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 HEPHQ9BQS7 1158 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 CRB3Q9BUF7 120 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 TEX101Q9BY14 249 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 DHX36Q9H2U1 1008 aaKnown RBP4.95□□□□□ -1.62
PTCH1-216ENST00000548379 CDYLQ9Y232 598 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 NEU2Q9Y3R4 380 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 USP15Q9Y4E8 981 aaPredicted RBP4.95□□□□□ -1.62
PTCH1-216ENST00000548379 PCDHGB2Q9Y5G2 931 aa4.95□□□□□ -1.62
PTCH1-216ENST00000548379 A0A087WV62 115 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 A0A087WZ62 844 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 A0A1W2PS29 197 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 F5H423 210 aaPredicted RBP4.94□□□□□ -1.62
PTCH1-216ENST00000548379 MYO1CO00159 1063 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 ADAMTS3O15072 1205 aa4.94□□□□□ -1.62
PTCH1-216ENST00000548379 THAP12O43422 761 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms