RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ZSWIM8A7E2V4 1837 aa16.41■□□□□ 0.22
BRF1-212ENST00000547562 VGLL3A8MV65 326 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 TCEA3O75764 348 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 IL18RAPO95256 599 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 CXCL8P10145 99 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 ATP5DP30049 168 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 PTPN7P35236 360 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 LACTBP83111 547 aaPredicted RBP16.4■□□□□ 0.22
BRF1-212ENST00000547562 P3H1Q32P28 736 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 TMEM63BQ5T3F8 832 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 TXNRD3NBQ6F5E7 133 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 MOB2Q70IA6 237 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 PRUNE1Q86TP1 453 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 CCHCR1Q8TD31 782 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 NXF1Q9UBU9 619 aaKnown RBP16.4■□□□□ 0.22
BRF1-212ENST00000547562 STRIP2Q9ULQ0 834 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 POLIQ9UNA4 740 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 TNFSF13BQ9Y275 285 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 ASAP2O43150 1006 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 CNGA2Q16280 664 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 TFDP3Q5H9I0 405 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 DENND1BQ6P3S1 775 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 TMEM192Q8IY95 271 aa16.4■□□□□ 0.22
BRF1-212ENST00000547562 ARHGEF2Q92974 986 aaKnown RBP16.4■□□□□ 0.22
BRF1-212ENST00000547562 PRMT1Q99873 361 aaKnown RBP16.4■□□□□ 0.22
BRF1-212ENST00000547562 RPF1Q9H9Y2 349 aaKnown RBP16.4■□□□□ 0.22
BRF1-212ENST00000547562 DDX56Q9NY93 547 aaKnown RBP16.4■□□□□ 0.22
BRF1-212ENST00000547562 hCG_1818297A0A087WSY0 165 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 KRT19P08727 400 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 IQCF3P0C7M6 154 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 PDE4CQ08493 712 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 PPIL2Q13356 520 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 MOGSQ13724 837 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 EAPPQ56P03 285 aaPredicted RBP16.39■□□□□ 0.21
BRF1-212ENST00000547562 WDR78Q5VTH9 848 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 CCDC121Q6ZUS5 278 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 ZCCHC9Q8N567 271 aaKnown RBP16.39■□□□□ 0.21
BRF1-212ENST00000547562 BCO2Q9BYV7 579 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 FOXP3Q9BZS1 431 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 FHDC1Q9C0D6 1143 aaPredicted RBP16.39■□□□□ 0.21
BRF1-212ENST00000547562 LHX5Q9H2C1 402 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 PDGFCQ9NRA1 345 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 SIX4Q9UIU6 781 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 ZNF148Q9UQR1 794 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 CD19P15391 556 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 RAP1GAPP47736 663 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 TTLL4Q14679 1199 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 PTPN20Q4JDL3 420 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 ZNF667Q5HYK9 610 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 ALLCQ8N6M5 410 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 NFKBIZQ9BYH8 718 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 MROH8Q9H579 483 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 CTNNAL1Q9UBT7 734 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 CAPN7Q9Y6W3 813 aa16.39■□□□□ 0.21
BRF1-212ENST00000547562 MED7O43513 233 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 C22orf31O95567 290 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 OSBPP22059 807 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 POLR2BP30876 1174 aaKnown RBP16.38■□□□□ 0.21
BRF1-212ENST00000547562 CDKN2BP42772 138 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 CEP128Q6ZU80 1094 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 POLNQ7Z5Q5 900 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 C1orf127Q8N9H9 656 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 GLIS1Q8NBF1 620 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 KAT2BQ92831 832 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 ACSF2Q96CM8 615 aaPredicted RBP16.38■□□□□ 0.21
BRF1-212ENST00000547562 RNPEPQ9H4A4 650 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 PRMT7Q9NVM4 692 aaPredicted RBP16.38■□□□□ 0.21
BRF1-212ENST00000547562 ERAP1Q9NZ08 941 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 DRG1Q9Y295 367 aaKnown RBP16.38■□□□□ 0.21
BRF1-212ENST00000547562 LRRD1A4D1F6 860 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 GPR25O00155 361 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 DNALI1O14645 258 aaPredicted RBP16.38■□□□□ 0.21
BRF1-212ENST00000547562 NFICP08651 508 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 RFC1P35251 1148 aaPredicted RBP16.38■□□□□ 0.21
BRF1-212ENST00000547562 TTLL12Q14166 644 aaPredicted RBP16.38■□□□□ 0.21
BRF1-212ENST00000547562 WDR72Q3MJ13 1102 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 C9orf72Q96LT7 481 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 RBM15Q96T37 977 aaKnown RBP eCLIP16.38■□□□□ 0.21
BRF1-212ENST00000547562 IFT122Q9HBG6 1241 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 CYTH4Q9UIA0 394 aa16.38■□□□□ 0.21
BRF1-212ENST00000547562 LOC102724159A0A0B4J2E5 919 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 SIGLEC16A6NMB1 481 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 GOLGA8SH3BPF8 625 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 KRT3P12035 628 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 ARSEP51690 589 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 RAD23BP54727 409 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 VCPP55072 806 aaKnown RBP16.37■□□□□ 0.21
BRF1-212ENST00000547562 ACTN3Q08043 901 aaPredicted RBP16.37■□□□□ 0.21
BRF1-212ENST00000547562 PWP2Q15269 919 aaKnown RBP16.37■□□□□ 0.21
BRF1-212ENST00000547562 OASLQ15646 514 aaKnown RBP16.37■□□□□ 0.21
BRF1-212ENST00000547562 FASTKD5Q7L8L6 764 aaKnown RBP16.37■□□□□ 0.21
BRF1-212ENST00000547562 LRRC34Q8IZ02 419 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 CDCA5Q96FF9 252 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 FAXDC2Q96IV6 333 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 OSBPL7Q9BZF2 842 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 LGALS13Q9UHV8 139 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 PLXNA1Q9UIW2 1896 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 TMEM120BA0PK00 339 aa16.37■□□□□ 0.21
BRF1-212ENST00000547562 ZSCAN5DPP0CG00 497 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms