RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 SYNPO2LQ9H987 977 aa2.72□□□□□ -1.97
CPNE8-205ENST00000547417 ARMT1Q9H993 441 aa2.72□□□□□ -1.97
CPNE8-205ENST00000547417 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.72□□□□□ -1.97
CPNE8-205ENST00000547417 ABCF2Q9UG63 623 aa2.72□□□□□ -1.97
CPNE8-205ENST00000547417 FEZ2Q9UHY8 353 aaPredicted RBP2.72□□□□□ -1.97
CPNE8-205ENST00000547417 EIF2B4Q9UI10 523 aaKnown RBP2.72□□□□□ -1.97
CPNE8-205ENST00000547417 CORO2BQ9UQ03 480 aa2.72□□□□□ -1.97
CPNE8-205ENST00000547417 CEP83Q9Y592 693 aa2.72□□□□□ -1.97
CPNE8-205ENST00000547417 PCDHA3Q9Y5H8 950 aa2.72□□□□□ -1.97
CPNE8-205ENST00000547417 MYBBP1AQ9BQG0 1328 aaKnown RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 GOLGA6L3A6NEY3 463 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 AHRRA9YTQ3 701 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 AREL1O15033 823 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 ADCY6O43306 1168 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 THAP12O43422 761 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 SKAP2O75563 359 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 CSTBP04080 98 aaKnown RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 CENPBP07199 599 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 IL2RBP14784 551 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 BRAFP15056 766 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 ZNF37AP17032 561 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 ZFP36P26651 326 aaKnown RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 HSPA7P48741 367 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 SUMO3P55854 103 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 ARL4CP56559 192 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 PER3P56645 1201 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 CTXN1P60606 82 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 MXRA7P84157 204 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 ATP8B2P98198 1209 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 TARDBPQ13148 414 aaKnown RBP eCLIP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 TBX2Q13207 712 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 SNAPC2Q13487 334 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 HABP2Q14520 560 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 STARD3Q14849 445 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 FAM214AQ32MH5 1076 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 FLYWCH1Q4VC44 716 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 CCDC38Q502W7 563 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 SLC44A4Q53GD3 710 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 COLEC12Q5KU26 742 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 WDR78Q5VTH9 848 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 HIBCHQ6NVY1 386 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 RFX8Q6ZV50 586 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 Q6ZVL8 140 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 PDZD4Q76G19 769 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 FAM83AQ86UY5 434 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 PQLC1Q8N2U9 271 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 CCDC33Q8N5R6 958 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 MSL3Q8N5Y2 521 aaKnown RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 IL17REQ8NFR9 667 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 OR6B3Q8NGW1 331 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 TRAPPC12Q8WVT3 735 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 IPCEF1Q8WWN9 437 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 KIAA1191Q96A73 305 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 NMD3Q96D46 503 aaKnown RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 MRGPRX1Q96LB2 322 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 NT5C1BQ96P26 610 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 VRK1Q99986 396 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 PAGR1Q9BTK6 254 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 SLC46A2Q9BY10 475 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 DPH1Q9BZG8 443 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 ZNF518BQ9C0D4 1074 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 EPC1Q9H2F5 836 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 MRPL46Q9H2W6 279 aaKnown RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 ZHX3Q9H4I2 956 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 SERHL2Q9H4I8 314 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 ZNF768Q9H5H4 540 aaKnown RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 LANCL2Q9NS86 450 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 TMEM140Q9NV12 185 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 C9orf78Q9NZ63 289 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 MYO1AQ9UBC5 1043 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 CDC23Q9UJX2 597 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 ZDHHC8Q9ULC8 765 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 MAGED2Q9UNF1 606 aaPredicted RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 SIK3Q9Y2K2 1263 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 LRRFIP2Q9Y608 721 aaKnown RBP2.71□□□□□ -1.98
CPNE8-205ENST00000547417 COX11Q9Y6N1 276 aa2.71□□□□□ -1.98
CPNE8-205ENST00000547417 USP19O94966 1318 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 TRIM43BA6NCK2 446 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 LRRC14BA6NHZ5 514 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 TMEM200CA6NKL6 621 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 CLCA1A8K7I4 914 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 KRTAP29-1A8MX34 341 aaPredicted RBP2.7□□□□□ -1.98
CPNE8-205ENST00000547417 NT5C1B-RDH14C9J2C7 533 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 NRP1O14786 923 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 NCK2O43639 380 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 LPXNO60711 386 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 PRAMEF4O60810 478 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 GPR32O75388 356 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 AMY1AP04745 511 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 DHRS4L1P0CG22 281 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 DDCP20711 480 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 EEF1GP26641 437 aaKnown RBP2.7□□□□□ -1.98
CPNE8-205ENST00000547417 PRDX5P30044 214 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 ADSLP30566 484 aaPredicted RBP2.7□□□□□ -1.98
CPNE8-205ENST00000547417 GUCY1A2P33402 732 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 SREBF1P36956 1147 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 ZEB1P37275 1124 aaPredicted RBP2.7□□□□□ -1.98
CPNE8-205ENST00000547417 AVPR1BP47901 424 aa2.7□□□□□ -1.98
CPNE8-205ENST00000547417 CLK3P49761 638 aaKnown RBP2.7□□□□□ -1.98
CPNE8-205ENST00000547417 PTTG1IPP53801 180 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms