RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCDC38-202ENST00000546386 RALAP11233 206 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 TNNC1P63316 161 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 CENPCQ03188 943 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 HP1BP3Q5SSJ5 553 aaPredicted RBP12.69□□□□□ -0.38
CCDC38-202ENST00000546386 PPP1R26Q5T8A7 1209 aaPredicted RBP12.69□□□□□ -0.38
CCDC38-202ENST00000546386 CCDC70Q6NSX1 233 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 HDXQ7Z353 690 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 EXOC8Q8IYI6 725 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 CLEC4CQ8WTT0 213 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 GAD1Q99259 594 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 MAF1Q9H063 256 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 CITO14578 2027 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 SYNJ2BP-COX16A0A087WUM0 186 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 SMIM28A0A1B0GU29 152 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 ERICH4A6NGS2 130 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 CASTOR2A6NHX0 329 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 POMCP01189 267 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 CHRNA1P02708 482 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 ERBB2P04626 1255 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 PLTPP55058 493 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 FCGRTP55899 365 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 PTP4A2Q12974 167 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 WDR93Q6P2C0 686 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 NOTUMQ6P988 496 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 ENOSF1Q7L5Y1 443 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 FAM228AQ86W67 206 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 CCDC105Q8IYK2 499 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 PRELID2Q8N945 189 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 METTL5Q9NRN9 209 aaKnown RBP12.68□□□□□ -0.38
CCDC38-202ENST00000546386 COX16Q9P0S2 106 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 ST3GAL5Q9UNP4 418 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 IPPQ9Y573 584 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 VCANP13611 3396 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 UNCXA6NJT0 531 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 SMIM23A6NLE4 172 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 KIAA0391O15091 583 aaKnown RBP12.68□□□□□ -0.38
CCDC38-202ENST00000546386 MICAL2O94851 1124 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 CD48P09326 243 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 CD52P31358 61 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 SREBF2Q12772 1141 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 C15orf59Q2T9L4 293 aaPredicted RBP12.68□□□□□ -0.38
CCDC38-202ENST00000546386 UBL4BQ8N7F7 174 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 STKLD1Q8NE28 680 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 PBKQ96KB5 322 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 MIOSQ9NXC5 875 aa12.68□□□□□ -0.38
CCDC38-202ENST00000546386 GRIN2DO15399 1336 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 FGFR1P11362 822 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 TFE3P19532 575 aaPredicted RBP12.67□□□□□ -0.38
CCDC38-202ENST00000546386 MMP8P22894 467 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 ZNF132P52740 706 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 ATXN1P54253 815 aaKnown RBP12.67□□□□□ -0.38
CCDC38-202ENST00000546386 ADAM17P78536 824 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 PTPN11Q06124 597 aaPredicted RBP12.67□□□□□ -0.38
CCDC38-202ENST00000546386 CCDC25Q86WR0 208 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 SH2D3CQ8N5H7 860 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 ACTRT1Q8TDG2 376 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 SH3TC2Q8TF17 1288 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 TMEM176AQ96HP8 235 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 TRPV6Q9H1D0 765 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 TSPAN16Q9UKR8 245 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 MBLAC1A4D2B0 266 aaPredicted RBP12.67□□□□□ -0.38
CCDC38-202ENST00000546386 RRN3P2A6NIE6 340 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 E5RJQ4 531 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 CYBAP13498 195 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 ETS1P14921 441 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 ABCD1P33897 745 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 BPIFB4P59827 614 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 DEFB115Q30KQ5 88 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 DNAJC24Q6P3W2 148 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 CCDC137Q6PK04 289 aaKnown RBP12.67□□□□□ -0.38
CCDC38-202ENST00000546386 SMG8Q8ND04 991 aaKnown RBP12.67□□□□□ -0.38
CCDC38-202ENST00000546386 RAPGEF5Q92565 580 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 CD101Q93033 1021 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 CCDC114Q96M63 670 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 RHOBTB2Q9BYZ6 727 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 TMEM59LQ9UK28 342 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 HPCAL4Q9UM19 191 aa12.67□□□□□ -0.38
CCDC38-202ENST00000546386 ANK1P16157 1881 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 SPTBN5Q9NRC6 3674 aaKnown RBP12.66□□□□□ -0.38
CCDC38-202ENST00000546386 A8MXQ7 604 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 MAP2K7O14733 419 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 CILPO75339 1184 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 ZSCAN5DPP0CG00 497 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 HOXD8P13378 290 aaPredicted RBP12.66□□□□□ -0.38
CCDC38-202ENST00000546386 NUMBP49757 651 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 DR1Q01658 176 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 SP3Q02447 781 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 SOWAHAQ2M3V2 549 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 UBXN11Q5T124 520 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 MFSD14CQ5VZR4 134 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 PMF1Q6P1K2 205 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 UBR7Q8N806 425 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 HSPH1Q92598 858 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 RPGRIP1Q96KN7 1286 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 GPATCH2LQ9NWQ4 482 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 DNAH14Q0VDD8 3507 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 SMIM35A0A1B0GVV1 85 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms