RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 SPACA3Q8IXA5 215 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 C19orf47Q8N9M1 422 aaKnown RBP7.57□□□□□ -1.2
LDHA-223ENST00000545215 ITFG1Q8TB96 612 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 PIGKQ92643 395 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 NACAP1Q9BZK3 213 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 SOX17Q9H6I2 414 aaPredicted RBP7.57□□□□□ -1.2
LDHA-223ENST00000545215 ZNF287Q9HBT7 754 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 ST7Q9NRC1 585 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 MTMR4Q9NYA4 1195 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 TUBE1Q9UJT0 475 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 MAPK8IP1Q9UQF2 711 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 PCDHB14Q9Y5E9 798 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 CENPEQ02224 2701 aa7.57□□□□□ -1.2
LDHA-223ENST00000545215 TLN1Q9Y490 2541 aaKnown RBP7.57□□□□□ -1.2
LDHA-223ENST00000545215 PDPK1O15530 556 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 PRDM1O75626 825 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 REC8O95072 547 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 TTLL1O95922 423 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 GSTP1P09211 210 aaKnown RBP7.56□□□□□ -1.2
LDHA-223ENST00000545215 TGFB3P10600 412 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 MCCP23508 829 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 ADH6P28332 368 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 GBP1P32455 592 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 NT5C2P49902 561 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 ATXN3P54252 364 aaPredicted RBP7.56□□□□□ -1.2
LDHA-223ENST00000545215 FXNQ16595 210 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 CLLU1OSQ5K130 101 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 SYDE2Q5VT97 1194 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.56□□□□□ -1.2
LDHA-223ENST00000545215 KCTD1Q719H9 257 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 NPAS3Q8IXF0 933 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 ZNF444Q8N0Y2 327 aaPredicted RBP7.56□□□□□ -1.2
LDHA-223ENST00000545215 CACTIN-AS1Q8N1I8 211 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 KCNB2Q92953 911 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 MSANTD3Q96H12 275 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 TAAR1Q96RJ0 339 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 TRMT61BQ9BVS5 477 aaKnown RBP7.56□□□□□ -1.2
LDHA-223ENST00000545215 BRINP2Q9C0B6 783 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 MLXIPQ9HAP2 919 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 EPB41L4AQ9HCS5 686 aaPredicted RBP7.56□□□□□ -1.2
LDHA-223ENST00000545215 ZNF215Q9UL58 517 aaPredicted RBP7.56□□□□□ -1.2
LDHA-223ENST00000545215 SLC8A2Q9UPR5 921 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 ADGRG4Q8IZF6 3080 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 CCDC171Q6TFL3 1326 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 DOCK6Q96HP0 2047 aa7.56□□□□□ -1.2
LDHA-223ENST00000545215 FAM149AA5PLN7 773 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 H3BRJ5 948 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 SGSM2O43147 1006 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 GAS2O43903 313 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 CBFA2T3O75081 653 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 GALTP07902 379 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 SNRPBP14678 240 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 SEMG2Q02383 582 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 RNASELQ05823 741 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 TMEM62Q0P6H9 643 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 NMIQ13287 307 aaPredicted RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 ARHGAP40Q5TG30 622 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 CWC27Q6UX04 472 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 C11orf74Q86VG3 221 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 ZC3H18Q86VM9 953 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 FCHSD1Q86WN1 690 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 SNRNP27Q8WVK2 155 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 NXPE2Q96DL1 559 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 CEP95Q96GE4 821 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 RPS6KC1Q96S38 1066 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 GTPBP2Q9BX10 602 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 MRPL9Q9BYD2 267 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 FAM49AQ9H0Q0 323 aaPredicted RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 TMEM74BQ9NUR3 256 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 GMPR2Q9P2T1 348 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 ST3GAL5Q9UNP4 418 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 NOC2LQ9Y3T9 749 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 SPG11Q96JI7 2443 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 MTCL1Q9Y4B5 1905 aaKnown RBP7.55□□□□□ -1.2
LDHA-223ENST00000545215 CELSR1Q9NYQ6 3014 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 KAT6AQ92794 2004 aa7.55□□□□□ -1.2
LDHA-223ENST00000545215 ICE1Q9Y2F5 2266 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 MEIS3P2A8K0S8 358 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 M0R2C6 588 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 PLK4O00444 970 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 GFRA2O00451 464 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 ZNF862O60290 1169 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 ATP9AO75110 1047 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 ZC3H11AO75152 810 aaKnown RBP eCLIP7.54□□□□□ -1.2
LDHA-223ENST00000545215 RPS6KA5O75582 802 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 SLC3A2P08195 630 aaKnown RBP7.54□□□□□ -1.2
LDHA-223ENST00000545215 MX2P20592 715 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 UBA1P22314 1058 aaKnown RBP7.54□□□□□ -1.2
LDHA-223ENST00000545215 UCNP55089 124 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 TMPRSS3P57727 454 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 IFRD2Q12894 506 aaPredicted RBP7.54□□□□□ -1.2
LDHA-223ENST00000545215 PPFIA1Q13136 1202 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 ALX1Q15699 326 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 GRIK4Q16099 956 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 ODR4Q5SWX8 454 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 RNF187Q5TA31 235 aaPredicted RBP7.54□□□□□ -1.2
LDHA-223ENST00000545215 HGSNATQ68CP4 663 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 PKN3Q6P5Z2 889 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 LILRA6Q6PI73 481 aa7.54□□□□□ -1.2
LDHA-223ENST00000545215 SKAP1Q86WV1 359 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms