RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 WNT8AQ9H1J5 351 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 FAM53CQ9NYF3 392 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 CEP350Q5VT06 3117 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 HCRTO43612 131 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 BUB1BO60566 1050 aaPredicted RBP19.24■□□□□ 0.67
CHERP-202ENST00000544299 NSFP46459 744 aaKnown RBP19.24■□□□□ 0.67
CHERP-202ENST00000544299 GRIK3Q13003 919 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 CLLU1OSQ5K130 101 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 MEI1Q5TIA1 1274 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 C1orf131Q8NDD1 294 aaKnown RBP19.24■□□□□ 0.67
CHERP-202ENST00000544299 C3orf58Q8NDZ4 430 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 DBF4BQ8NFT6 615 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 PAAF1Q9BRP4 392 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 FTHL17Q9BXU8 183 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 AVENQ9NQS1 362 aaPredicted RBP19.24■□□□□ 0.67
CHERP-202ENST00000544299 CNOT8Q9UFF9 292 aaKnown RBP19.24■□□□□ 0.67
CHERP-202ENST00000544299 RAB21Q9UL25 225 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 SNX12Q9UMY4 172 aa19.24■□□□□ 0.67
CHERP-202ENST00000544299 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.24■□□□□ 0.67
CHERP-202ENST00000544299 DCDC2CA8MYV0 355 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 O00370 1275 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 PODXLO00592 558 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 ZRANB2O95218 330 aaKnown RBP eCLIP19.23■□□□□ 0.67
CHERP-202ENST00000544299 EOMESO95936 686 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 POMCP01189 267 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 HSPA1AP0DMV8 641 aaKnown RBP19.23■□□□□ 0.67
CHERP-202ENST00000544299 HSPA1BP0DMV9 641 aaKnown RBP19.23■□□□□ 0.67
CHERP-202ENST00000544299 VDRP11473 427 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 TCP1P17987 556 aaKnown RBP19.23■□□□□ 0.67
CHERP-202ENST00000544299 CTCFP49711 727 aaPredicted RBP19.23■□□□□ 0.67
CHERP-202ENST00000544299 CLCNKBP51801 687 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 ITIH3Q06033 890 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 C2CD6Q53TS8 623 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 LLGL2Q6P1M3 1020 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 OSTM1Q86WC4 334 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 C11orf70Q9BRQ4 267 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 PARD6BQ9BYG5 372 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 LHX5Q9H2C1 402 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 HIPK3Q9H422 1215 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 ABCB6Q9NP58 842 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 CTTNBP2NLQ9P2B4 639 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 TBX21Q9UL17 535 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.23■□□□□ 0.67
CHERP-202ENST00000544299 INPP5FQ9Y2H2 1132 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 STXBP5LQ9Y2K9 1186 aa19.23■□□□□ 0.67
CHERP-202ENST00000544299 CASTOR2A6NHX0 329 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 MED7O43513 233 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 CXCL10P02778 98 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 RRM1P23921 792 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 RPL9P32969 192 aaKnown RBP19.22■□□□□ 0.67
CHERP-202ENST00000544299 FAM193AP78312 1265 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 C1QBPQ07021 282 aaKnown RBP19.22■□□□□ 0.67
CHERP-202ENST00000544299 CD300LGQ6UXG3 332 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 MMS22LQ6ZRQ5 1243 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 UNC93AQ86WB7 457 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 TOP6BLQ8N6T0 577 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 ANKLE1Q8NAG6 615 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 RUBCNQ92622 972 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 SCLYQ96I15 445 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 HEXIM2Q96MH2 286 aaKnown RBP19.22■□□□□ 0.67
CHERP-202ENST00000544299 NUP85Q9BW27 656 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 RNF14Q9UBS8 474 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 CYTH4Q9UIA0 394 aa19.22■□□□□ 0.67
CHERP-202ENST00000544299 ENPP3O14638 875 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 B4GALT3O60512 393 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 SRGAP2O75044 1071 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 MICAL2O94851 1124 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 MYBL1P10243 752 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 MMP8P22894 467 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 CNGA2Q16280 664 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 UPP1Q16831 310 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 SGO2Q562F6 1265 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 CCDC70Q6NSX1 233 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 ACOT1Q86TX2 421 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 TMEM35BQ8NCS4 154 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 SEPT8Q92599 483 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 TRIM11Q96F44 468 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 VCPIP1Q96JH7 1222 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 PPP1R12CQ9BZL4 782 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 ZNF518BQ9C0D4 1074 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 DPEP3Q9H4B8 488 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 ADAM22Q9P0K1 906 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 KIAA1257Q9ULG3 409 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 WARSP23381 471 aaKnown RBP19.21■□□□□ 0.67
CHERP-202ENST00000544299 CYP2C18P33260 490 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 AARSP49588 968 aaKnown RBP eCLIP19.21■□□□□ 0.67
CHERP-202ENST00000544299 CCL23P55773 120 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 PPP1R2P3Q6NXS1 205 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 CC2D1AQ6P1N0 951 aaPredicted RBP19.21■□□□□ 0.67
CHERP-202ENST00000544299 NT5DC3Q86UY8 548 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 ADGRF2Q8IZF7 708 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 C12orf29Q8N999 325 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 APPL2Q8NEU8 664 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 OR6B3Q8NGW1 331 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 ZNF564Q8TBZ8 553 aaPredicted RBP19.21■□□□□ 0.67
CHERP-202ENST00000544299 UVRAGQ9P2Y5 699 aa19.21■□□□□ 0.67
CHERP-202ENST00000544299 PACSIN2Q9UNF0 486 aaPredicted RBP19.21■□□□□ 0.67
CHERP-202ENST00000544299 TSC2P49815 1807 aa19.21■□□□□ 0.66
CHERP-202ENST00000544299 CYB561D2O14569 222 aa19.2■□□□□ 0.66
CHERP-202ENST00000544299 LMO2P25791 158 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms