RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 RRM1P23921 792 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 NAMPTP43490 491 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 GPC3P51654 580 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 PMS2P54278 862 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 HADHBP55084 474 aaKnown RBP15.87■□□□□ 0.13
CHFR-223ENST00000544268 SETDB1Q15047 1291 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 SLC13A5Q86YT5 568 aaPredicted RBP15.87■□□□□ 0.13
CHFR-223ENST00000544268 CCDC105Q8IYK2 499 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 OR6J1Q8NGC5 347 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 EPS8L3Q8TE67 593 aaKnown RBP15.87■□□□□ 0.13
CHFR-223ENST00000544268 TMEM174Q8WUU8 243 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 PRPF31Q8WWY3 499 aaKnown RBP15.87■□□□□ 0.13
CHFR-223ENST00000544268 MFSD14AQ96MC6 490 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 XPO6Q96QU8 1125 aaKnown RBP15.87■□□□□ 0.13
CHFR-223ENST00000544268 PPME1Q9Y570 386 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 UMODL1Q5DID0 1318 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 HBP1O60381 514 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 RGS2P41220 211 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 TNFAIP2Q03169 654 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 MTMR3Q13615 1198 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 CAPSQ13938 189 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 CCDC38Q502W7 563 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 CWF19L1Q69YN2 538 aaKnown RBP15.87■□□□□ 0.13
CHFR-223ENST00000544268 PIGWQ7Z7B1 504 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 DRAXINQ8NBI3 349 aaPredicted RBP15.87■□□□□ 0.13
CHFR-223ENST00000544268 C16orf70Q9BSU1 422 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 SUDS3Q9H7L9 328 aaPredicted RBP15.87■□□□□ 0.13
CHFR-223ENST00000544268 CHST7Q9NS84 486 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 ZFATQ9P243 1243 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 ANAPC7Q9UJX3 599 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 COQ4Q9Y3A0 265 aa15.87■□□□□ 0.13
CHFR-223ENST00000544268 IGKV6-21A0A0C4DH24 114 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 TP73O15350 636 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 CDC25CP30307 473 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 PAPOLAP51003 745 aaKnown RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 CCNG1P51959 295 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 SNRPFP62306 86 aaKnown RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 ANKS1BQ7Z6G8 1248 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 TMEM130Q8N3G9 435 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 DEPTORQ8TB45 409 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 PSPC1Q8WXF1 523 aaKnown RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 LENG1Q96BZ8 264 aaPredicted RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 FBXL18Q96ME1 805 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 ANKRD27Q96NW4 1050 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 DDX23Q9BUQ8 820 aaKnown RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 HEMGNQ9BXL5 484 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 FAM129AQ9BZQ8 928 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 ARHGAP39Q9C0H5 1083 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 ZNF865P0CJ78 1059 aaPredicted RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 HARSP12081 509 aaKnown RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 GZMAP12544 262 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 NQO1P15559 274 aaKnown RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 COILP38432 576 aaPredicted RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 VPS41P49754 854 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 IGBP1P78318 339 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 SEL1L2Q5TEA6 688 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 TDRD10Q5VZ19 366 aaKnown RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 TEX9Q8N6V9 391 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 SOCS4Q8WXH5 440 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 ZNF317Q96PQ6 595 aaPredicted RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 TSPAN18Q96SJ8 248 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 APBA2Q99767 749 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 R3HDM2Q9Y2K5 976 aaKnown RBP15.86■□□□□ 0.13
CHFR-223ENST00000544268 MROH7Q68CQ1 1323 aa15.86■□□□□ 0.13
CHFR-223ENST00000544268 ZSWIM8A7E2V4 1837 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 MIF4GDA9UHW6 222 aaKnown RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 H0YCG3 227 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 MMP3P08254 477 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 INSRRP14616 1297 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 GJC1P36383 396 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 IER5Q5VY09 327 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 OLFML2BQ68BL8 750 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 GPD1LQ8N335 351 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 NAP1L3Q99457 506 aaPredicted RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 APOBEC3GQ9HC16 384 aaKnown RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 PAPOLBQ9NRJ5 636 aaKnown RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 KLHL11Q9NVR0 708 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 GTF3C4Q9UKN8 822 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 ZNF232Q9UNY5 417 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 EVPLQ92817 2033 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 DYNC1LI2O43237 492 aaPredicted RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 GJB1P08034 283 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 TNNI1P19237 187 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 ABCD1P33897 745 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 ROR2Q01974 943 aaKnown RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 NOGQ13253 232 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 DHX34Q14147 1143 aaKnown RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 CLEC16AQ2KHT3 1053 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 BRDTQ58F21 947 aaPredicted RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 ACAD10Q6JQN1 1059 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 RPS6KC1Q96S38 1066 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 PABPC3Q9H361 631 aaKnown RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 ANKFY1Q9P2R3 1169 aa15.85■□□□□ 0.13
CHFR-223ENST00000544268 GNEQ9Y223 722 aaKnown RBP15.85■□□□□ 0.13
CHFR-223ENST00000544268 MGAMO43451 1857 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 H3BRB1 525 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 K7ERI5 159 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 MAPK13O15264 365 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 VNN1O95497 513 aa15.84■□□□□ 0.13
CHFR-223ENST00000544268 HOXD8P13378 290 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms