RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 KBTBD6Q86V97 674 aa21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 CMTM8Q8IZV2 173 aa21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 C12orf50Q8NA57 414 aaPredicted RBP21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 C2orf15Q8WU43 125 aaKnown RBP21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 CHFRQ96EP1 664 aa21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 CDK5RAP3Q96JB5 506 aa21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 GCNAQ96QF7 691 aa21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 MSTO1Q9BUK6 570 aa21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 RXFP3Q9NSD7 469 aa21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 DERAQ9Y315 318 aa21.6■■□□□ 1.05
LPCAT3-211ENST00000543794 NFICP08651 508 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 SMARCB1Q12824 385 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 RUNX3Q13761 415 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 CCDC6Q16204 474 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 TAF12Q16514 161 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 FSTL4Q6MZW2 842 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 LRRTM3Q86VH5 581 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 GIPC2Q8TF65 315 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 REEP2Q9BRK0 252 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 HPS4Q9NQG7 708 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 ANGPTL2Q9UKU9 493 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 SLC8A2Q9UPR5 921 aa21.59■■□□□ 1.05
LPCAT3-211ENST00000543794 VWA3AA6NCI4 1184 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 OTOL1A6NHN0 477 aaPredicted RBP21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 CYB561D2O14569 222 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 AKAP3O75969 853 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 HAPLN1P10915 354 aaPredicted RBP21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 KCNA4P22459 653 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 CDR1P51861 262 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 ZNF131P52739 623 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 TMEM132DQ14C87 1099 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 PLA2G2CQ5R387 149 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 SLC39A4Q6P5W5 647 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 TMEM150AQ86TG1 271 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 METTL23Q86XA0 190 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 THEM5Q8N1Q8 247 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 MYCT1Q8N699 235 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 SPPL2BQ8TCT7 592 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 ZC3H10Q96K80 434 aaKnown RBP21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 ASB7Q9H672 318 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 PCDHGA5Q9Y5G8 931 aa21.58■■□□□ 1.05
LPCAT3-211ENST00000543794 F11P03951 625 aa21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 HMGA1P17096 107 aaKnown RBP21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 SHC2P98077 582 aa21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 STPG1Q5TH74 334 aa21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 ARL6IP4Q66PJ3 421 aaKnown RBP21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 CAMKK1Q8N5S9 505 aa21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 USP13Q92995 863 aaPredicted RBP21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 EBF3Q9H4W6 596 aa21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 PARVGQ9HBI0 331 aa21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 CCL26Q9Y258 94 aa21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 C2CD2Q9Y426 696 aa21.57■■□□□ 1.04
LPCAT3-211ENST00000543794 NUP210Q8TEM1 1887 aaPredicted RBP21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 USP24Q9UPU5 2620 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 SOBPA7XYQ1 873 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 K7ENM7 598 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 SLC26A4O43511 780 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 TRAK2O60296 914 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 CCDC192P0DO97 292 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 DDX6P26196 483 aaKnown RBP eCLIP21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 AVPR1AP37288 418 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 NLRP12P59046 1061 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 GTF2BQ00403 316 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 AMPD2Q01433 879 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 WSCD1Q658N2 575 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 TRIM68Q6AZZ1 485 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 GPBP1Q86WP2 473 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 MAB21L3Q8N8X9 362 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 FIZ1Q96SL8 496 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 CCSER1Q9C0I3 900 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 FBRSL1Q9HCM7 1045 aaKnown RBP21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 TDP1Q9NUW8 608 aa21.56■■□□□ 1.04
LPCAT3-211ENST00000543794 FAM13AO94988 1023 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 EGFP01133 1207 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 ACOT2P49753 483 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 TAF6P49848 677 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 MCTP1Q6DN14 999 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 LRRC15Q8TF66 581 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 AK8Q96MA6 479 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 KIF2CQ99661 725 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 PYM1Q9BRP8 204 aaKnown RBP21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 LSM14BQ9BX40 385 aaKnown RBP21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 KIF9Q9HAQ2 790 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 DPP3Q9NY33 737 aa21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 ABI2Q9NYB9 513 aaPredicted RBP21.55■■□□□ 1.04
LPCAT3-211ENST00000543794 MYH11P35749 1972 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 ANKRD63C9JTQ0 380 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 RNF40O75150 1001 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 DRD1P21728 446 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 NMT1P30419 496 aaKnown RBP21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 ABCD1P33897 745 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 GALK1P51570 392 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 POU5F1Q01860 360 aaKnown RBP21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 BFSP1Q12934 665 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 TXNDC8Q6A555 127 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 MON1AQ86VX9 555 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 DCP1BQ8IZD4 617 aaKnown RBP21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 RIN3Q8TB24 985 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 VPS45Q9NRW7 570 aa21.54■■□□□ 1.04
LPCAT3-211ENST00000543794 POLR3BQ9NW08 1133 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms