RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 TFDP3Q5H9I0 405 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 LLGL2Q6P1M3 1020 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 MFSD7Q6UXD7 560 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 UBR7Q8N806 425 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 NLGN2Q8NFZ4 835 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 NAF1Q96HR8 494 aaKnown RBP14.46□□□□□ -0.09
VPS33A-208ENST00000543633 RMDN3Q96TC7 470 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 KIAA1683Q9H0B3 1180 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 XPNPEP1Q9NQW7 623 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 AGO2Q9UKV8 859 aaKnown RBP14.46□□□□□ -0.09
VPS33A-208ENST00000543633 FARP1Q9Y4F1 1045 aaPredicted RBP14.46□□□□□ -0.09
VPS33A-208ENST00000543633 KIAA1217Q5T5P2 1943 aa14.46□□□□□ -0.09
VPS33A-208ENST00000543633 ZNF862O60290 1169 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 IL1BP01584 269 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 TPBGLP0DKB5 382 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 T-ENOLP0DO92 83 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 TARSP26639 723 aaKnown RBP14.46□□□□□ -0.1
VPS33A-208ENST00000543633 RPA3P35244 121 aaPredicted RBP14.46□□□□□ -0.1
VPS33A-208ENST00000543633 SSR1P43307 286 aaKnown RBP14.46□□□□□ -0.1
VPS33A-208ENST00000543633 AP3M2P53677 418 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 IRX1P78414 480 aaPredicted RBP14.46□□□□□ -0.1
VPS33A-208ENST00000543633 SLC1A5Q15758 541 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 HIF1AQ16665 826 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 ADGRD1Q6QNK2 874 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.1
VPS33A-208ENST00000543633 TMEM270Q6UE05 265 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.46□□□□□ -0.1
VPS33A-208ENST00000543633 TTC13Q8NBP0 860 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 SLC35B2Q8TB61 432 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 ZNF75CPQ92670 426 aaPredicted RBP14.46□□□□□ -0.1
VPS33A-208ENST00000543633 TBC1D10AQ9BXI6 508 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 ZNF341Q9BYN7 854 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 GLIS2Q9BZE0 524 aaPredicted RBP14.46□□□□□ -0.1
VPS33A-208ENST00000543633 ANKFY1Q9P2R3 1169 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 GRID1Q9ULK0 1009 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 USTQ9Y2C2 406 aa14.46□□□□□ -0.1
VPS33A-208ENST00000543633 SSC5DA1L4H1 1573 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 E7ESA3 106 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 MYCLP12524 364 aaPredicted RBP14.45□□□□□ -0.1
VPS33A-208ENST00000543633 PAX7P23759 505 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 GCKP35557 465 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 GJC1P36383 396 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 ARL4CP56559 192 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 NOP14P78316 857 aaKnown RBP14.45□□□□□ -0.1
VPS33A-208ENST00000543633 ADCY1Q08828 1119 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 NLRP9Q7RTR0 991 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 OTOAQ7RTW8 1153 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 PRUNE1Q86TP1 453 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 PPIL6Q8IXY8 311 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 ZBED8Q8IZ13 594 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 CDHR1Q96JP9 859 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 FAM118BQ9BPY3 351 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 POLR3FQ9H1D9 316 aaPredicted RBP14.45□□□□□ -0.1
VPS33A-208ENST00000543633 VPS11Q9H270 941 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 ACSS3Q9H6R3 686 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 APOBEC3GQ9HC16 384 aaKnown RBP14.45□□□□□ -0.1
VPS33A-208ENST00000543633 SLCO1B3Q9NPD5 702 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 GABBR1Q9UBS5 961 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 ZFP69BQ9UJL9 534 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 HAO1Q9UJM8 370 aa14.45□□□□□ -0.1
VPS33A-208ENST00000543633 ZMYND8Q9ULU4 1186 aaPredicted RBP14.45□□□□□ -0.1
VPS33A-208ENST00000543633 RAD17O75943 681 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 ATF7P17544 494 aaPredicted RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 ATP6V1C1P21283 382 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 CDH5P33151 784 aaPredicted RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 CDKN2BP42772 138 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 PDIA2Q13087 525 aaKnown RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 GRM1Q13255 1194 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 FASTKD3Q14CZ7 662 aaKnown RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 PPP1R15BQ5SWA1 713 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 ARHGEF16Q5VV41 709 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 DAB2IPQ5VWQ8 1189 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 CDCA2Q69YH5 1023 aaPredicted RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 CAPRIN2Q6IMN6 1127 aaKnown RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 DNAJC24Q6P3W2 148 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 LVRNQ6Q4G3 990 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 PHLDB2Q86SQ0 1253 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 LONP2Q86WA8 852 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 CHSY1Q86X52 802 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 LMNTD2Q8IXW0 634 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 GLIS1Q8NBF1 620 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 ASAP3Q8TDY4 903 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 MAF1Q9H063 256 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 DCLRE1BQ9H816 532 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 RAVER2Q9HCJ3 691 aaKnown RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 CYP26B1Q9NR63 512 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 PGAP2Q9UHJ9 254 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 RABGEF1Q9UJ41 708 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 ZNRF3Q9ULT6 936 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 SNCAIPQ9Y6H5 919 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 TESPA1A2RU30 521 aaPredicted RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 A6NHS1 94 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 ACADSP16219 412 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 MARK3P27448 753 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 MRPS35P82673 323 aaKnown RBP14.44□□□□□ -0.1
VPS33A-208ENST00000543633 ZNF252P-AS1Q0IIN9 211 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 CBLBQ13191 982 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 TSNAXIP1Q2TAA8 658 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 C2CD6Q53TS8 623 aa14.44□□□□□ -0.1
VPS33A-208ENST00000543633 FAM91A1Q658Y4 838 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms