RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 GYPCP04921 128 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PDGFRBP09619 1106 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 VDRP11473 427 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PTPN1P18031 435 aaKnown RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 TRIM21P19474 475 aaKnown RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PCSK1P29120 753 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 CASP14P31944 242 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 CTNNB1P35222 781 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PRKCIP41743 596 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 STAT1P42224 750 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 GLUD2P49448 558 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 FXR1P51114 621 aaKnown RBP eCLIP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 NDST1P52848 882 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 BPIFB4P59827 614 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 ZBED6P86452 979 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PLCB2Q00722 1185 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 KCNC3Q14003 757 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PTPN14Q15678 1187 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 CNGA2Q16280 664 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 MEA1Q16626 185 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PTPN21Q16825 1174 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 ARHGAP44Q17R89 818 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PPP2R2DQ66LE6 453 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 TPGS2Q68CL5 300 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 ARHGAP17Q68EM7 881 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 OVOS1Q6IE37 1185 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PAQR9Q6ZVX9 377 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 RTL10Q7L3V2 364 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 TMC7Q7Z402 723 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 CEP57Q86XR8 500 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 FMNL3Q8IVF7 1028 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 ADGRF2Q8IZF7 708 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 OR6B3Q8NGW1 331 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 OR10T2Q8NGX3 314 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 ZNF461Q8TAF7 563 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 MYCBPAPQ8TBZ2 947 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 C2orf15Q8WU43 125 aaKnown RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 ZNF606Q8WXB4 792 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 TMEM176AQ96HP8 235 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 PDLIM2Q96JY6 352 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 TNIP3Q96KP6 325 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 KLHL5Q96PQ7 755 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 TWNKQ96RR1 684 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 ARID3AQ99856 593 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 SYT11Q9BT88 431 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 UBXN6Q9BZV1 441 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 ELOVL4Q9GZR5 314 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 TTYH1Q9H313 450 aaPredicted RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 SMYD3Q9H7B4 428 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 NLRC4Q9NPP4 1024 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 TLR9Q9NR96 1032 aa6.26□□□□□ -1.41
ABCF1-207ENST00000542772 MRPL17Q9NRX2 175 aaKnown RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 FAM207AQ9NSI2 230 aaPredicted RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 LUC7L2Q9Y383 392 aaKnown RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 MTCL1Q9Y4B5 1905 aaKnown RBP6.26□□□□□ -1.41
ABCF1-207ENST00000542772 MYBPHLA2RUH7 354 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 C2orf71A6NGG8 1288 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 EPOPA6NHQ4 379 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 F8VZ95 297 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 RFXAPO00287 272 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 TEX28O15482 410 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 ATP2C2O75185 946 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CNPP09543 421 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CCDC172P0C7W6 258 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 ATF2P15336 505 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 FERP16591 822 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 FECHP22830 423 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 OR1D2P34982 312 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 KRT9P35527 623 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 IRS1P35568 1242 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 SOX5P35711 763 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 RAP1GAPP47736 663 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 RPL34P49207 117 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CDK17Q00537 523 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CREMQ03060 361 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 PTK2Q05397 1052 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 SMC1AQ14683 1233 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 BMS1Q14692 1282 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 MAPRE1Q15691 268 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 PSMD5Q16401 504 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 NFE2Q16621 373 aaPredicted RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CFAP221Q4G0U5 840 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CTXN3Q4LDR2 81 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 PKDCCQ504Y2 493 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 INTS6LQ5JSJ4 861 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 HABP4Q5JVS0 413 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 HGSNATQ68CP4 663 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 ZNF280DQ6N043 979 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 KIAA1841Q6NSI8 718 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 WDR59Q6PJI9 974 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 TMEM270Q6UE05 265 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 PRSS55Q6UWB4 352 aaPredicted RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 LCLAT1Q6UWP7 414 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 TMEM184AQ6ZMB5 413 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 CACNA2D4Q7Z3S7 1137 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 ZNF677Q86XU0 584 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 DCP1BQ8IZD4 617 aaKnown RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 TC2NQ8N9U0 490 aa6.25□□□□□ -1.41
ABCF1-207ENST00000542772 ZNF397Q8NF99 534 aaPredicted RBP6.25□□□□□ -1.41
ABCF1-207ENST00000542772 OR8K1Q8NGG5 319 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms