RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 DDR1Q08345 913 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 MXD4Q14582 209 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 FAM47CQ5HY64 1035 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 PTF1AQ7RTS3 328 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 MTDHQ86UE4 582 aaKnown RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 TTC39CQ8N584 583 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 ZNF606Q8WXB4 792 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 WDR18Q9BV38 432 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 KLHL8Q9P2G9 620 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 NR2E1Q9Y466 385 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 ATXN2Q99700 1313 aaKnown RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 TRPA1O75762 1119 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 SOX10P56693 466 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 OTUD4Q01804 1114 aaKnown RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 C1QBPQ07021 282 aaKnown RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 PTK6Q13882 451 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 HIC1Q14526 733 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 ARMCX2Q7L311 632 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 SLFN11Q7Z7L1 901 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 CDKL3Q8IVW4 592 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 ARID3BQ8IVW6 561 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 HACE1Q8IYU2 909 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 NDUFAF2Q8N183 169 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 FBXO36Q8NEA4 188 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 ART4Q93070 314 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 MTBPQ96DY7 904 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 NAF1Q96HR8 494 aaKnown RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 GCOM2Q9BZD3 368 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 OSBPL7Q9BZF2 842 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 BFARQ9NZS9 450 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 FAM198AQ9UFP1 575 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 GRIN2DO15399 1336 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 TRIM49D1C9J1S8 452 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 FSCN2O14926 492 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 PECAM1P16284 738 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 ZFXP17010 805 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 VCAM1P19320 739 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 CPA2P48052 419 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 SESN2P58004 480 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 DNAL1Q4LDG9 190 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 MDH1BQ5I0G3 518 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 TMEM154Q6P9G4 183 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 CRELD2Q6UXH1 353 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 SPOCD1Q6ZMY3 1216 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 RGS9BPQ6ZS82 235 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 PAXIP1Q6ZW49 1069 aaPredicted RBP8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 RASSF3Q86WH2 238 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 PIP4K2CQ8TBX8 421 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 E2F7Q96AV8 911 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 DLGAP2Q9P1A6 1054 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 PCDH10Q9P2E7 1040 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 C15orf41Q9Y2V0 281 aa8.6□□□□□ -1.03
PRKAB1-207ENST00000542698 PABPN1LA6NDY0 278 aaKnown RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SPDYE2BA6NHP3 402 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 KPNA7A9QM74 516 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 ANKRD63C9JTQ0 380 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 F5H423 210 aaPredicted RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 H3BRJ5 948 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 DNALI1O14645 258 aaPredicted RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 NKRFO15226 690 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 GRAP2O75791 330 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 CYP1A2P05177 515 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SPDYE6P0CI01 402 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SRGAP2BP0DMP2 458 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 FMO1Q01740 532 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 PKN2Q16513 984 aaKnown RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 TAF1BQ53T94 588 aaPredicted RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SIX6OS1Q8N1H7 587 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 LRRC15Q8TF66 581 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SPIRE2Q8WWL2 714 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 KAT2BQ92831 832 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 PAFAH2Q99487 392 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 EFHD1Q9BUP0 239 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 ZFATQ9P243 1243 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 RGS17Q9UGC6 210 aaPredicted RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 VAV3Q9UKW4 847 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 DNPEPQ9ULA0 475 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 AGAP1Q9UPQ3 857 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SHOC2Q9UQ13 582 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 OPLAHO14841 1288 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 VHLP40337 213 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 VCPP55072 806 aaKnown RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 KCNJ2P63252 427 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 GTF2BQ00403 316 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 XRCC4Q13426 336 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 MFSD7Q6UXD7 560 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 NIPA1Q7RTP0 329 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 ZNF280CQ8ND82 737 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 MRIQ9BWK5 157 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 ZNF518BQ9C0D4 1074 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 PCDH9Q9HC56 1237 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 DISP2A7MBM2 1401 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 CASZ1Q86V15 1759 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 DNM1LO00429 736 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 PTPN4P29074 926 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SSTR1P30872 391 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 RFC5P40937 340 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms