RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 FAM160A2Q8N612 972 aaPredicted RBP16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 BPIFB1Q8TDL5 484 aa16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 PYM1Q9BRP8 204 aaKnown RBP16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 RTKNQ9BST9 563 aa16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 TASP1Q9H6P5 420 aa16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 RXFP3Q9NSD7 469 aa16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 RAB23Q9ULC3 237 aa16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 ASB3Q9Y575 518 aa16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 ASPMQ8IZT6 3477 aa16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 KIAA1549LQ6ZVL6 1849 aa16.73■□□□□ 0.27
CLSTN3-213ENST00000541953 GREB1Q4ZG55 1949 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 ZNF638Q14966 1978 aaKnown RBP16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 CYB561D2O14569 222 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 XPOTO43592 962 aaKnown RBP16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 HCRTO43612 131 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 TADA3O75528 432 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 HMGA1P17096 107 aaKnown RBP16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 ADSSP30520 456 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 FSTL4Q6MZW2 842 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 ARMCX5Q6P1M9 558 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 PRR23CQ6ZRP0 262 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 LONP2Q86WA8 852 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 KCTD17Q8N5Z5 321 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 MSANTD3Q96H12 275 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 FBRSL1Q9HCM7 1045 aaKnown RBP16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 DPP3Q9NY33 737 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 ABI2Q9NYB9 513 aaPredicted RBP16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 KCNG1Q9UIX4 513 aa16.72■□□□□ 0.27
CLSTN3-213ENST00000541953 WDFY3Q8IZQ1 3526 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 H3BQV1 296 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 DPYSL4O14531 572 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 SLC30A4O14863 429 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 PPP1R37O75864 691 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 HAPLN1P10915 354 aaPredicted RBP16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 ARSAP15289 507 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 UBA7P41226 1012 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 PPP2R5DQ14738 602 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 KYAT1Q16773 422 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 ADALQ6DHV7 355 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 ITIH5Q86UX2 942 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 SFR1Q86XK3 245 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 USP13Q92995 863 aaPredicted RBP16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 CALML4Q96GE6 196 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 AK8Q96MA6 479 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 FAM83CQ9BQN1 747 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 FGFBP2Q9BYJ0 223 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 OBP2AQ9NY56 170 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 HSFX1Q9UBD0 423 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 C2CD2Q9Y426 696 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 STYXL1Q9Y6J8 313 aa16.71■□□□□ 0.27
CLSTN3-213ENST00000541953 SPAG17Q6Q759 2223 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 F11P03951 625 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 ADRB1P08588 477 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 WEE1P30291 646 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 MCM2P49736 904 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 TAF6P49848 677 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 NLRP12P59046 1061 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 RABEP1Q15276 862 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 SF3A2Q15428 464 aaKnown RBP16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 CSRP2Q16527 193 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 ARHGAP15Q53QZ3 475 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 PPM1JQ5JR12 505 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 DGKKQ5KSL6 1271 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 TXNDC8Q6A555 127 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 DYMQ7RTS9 669 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 OSTM1Q86WC4 334 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 CMTM8Q8IZV2 173 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 MAB21L3Q8N8X9 362 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 NETO1Q8TDF5 533 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 LARP4BQ92615 738 aaKnown RBP16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 EZH1Q92800 747 aaPredicted RBP16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 EPSTI1Q96J88 318 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 STRA6Q9BX79 667 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 SMOC1Q9H4F8 434 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 EBF3Q9H4W6 596 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 GKN1Q9NS71 199 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 AGO2Q9UKV8 859 aaKnown RBP16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 DERAQ9Y315 318 aa16.7■□□□□ 0.26
CLSTN3-213ENST00000541953 ANAPC1Q9H1A4 1944 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 ANTXRLA6NF34 631 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 TBCAO75347 108 aaKnown RBP16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 EGFP01133 1207 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 SDHBP21912 280 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 ACAT1P24752 427 aaKnown RBP16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 CDC25CP30307 473 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 TUFMP49411 452 aaKnown RBP16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 CASP5P51878 434 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 SF3A1Q15459 793 aaKnown RBP16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 ITPRIPL2Q3MIP1 535 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 WDR5BQ86VZ2 330 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 CD302Q8IX05 232 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 CXorf38Q8TB03 319 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 SLC22A12Q96S37 553 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 TSPAN18Q96SJ8 248 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 PI4K2AQ9BTU6 479 aa16.69■□□□□ 0.26
CLSTN3-213ENST00000541953 CCSER1Q9C0I3 900 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms