RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 ZFP14Q9HCL3 533 aa23.73■■□□□ 1.39
C2CD3-216ENST00000541922 DDX43Q9NXZ2 648 aaKnown RBP23.73■■□□□ 1.39
C2CD3-216ENST00000541922 ABI2Q9NYB9 513 aaPredicted RBP23.73■■□□□ 1.39
C2CD3-216ENST00000541922 EXOC3O60645 756 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 MOSPD3O75425 235 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 RPN1P04843 607 aaKnown RBP23.72■■□□□ 1.39
C2CD3-216ENST00000541922 TCF15Q12870 199 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 VEPH1Q14D04 833 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 TEAD2Q15562 447 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 FAM78AQ5JUQ0 283 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 TANGO2Q6ICL3 276 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 TRAPPC11Q7Z392 1133 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 DNAJB7Q7Z6W7 309 aaPredicted RBP23.72■■□□□ 1.39
C2CD3-216ENST00000541922 TMC8Q8IU68 726 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 SHKBP1Q8TBC3 707 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 SPATA18Q8TC71 538 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 PSMG2Q969U7 264 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 ELSPBP1Q96BH3 223 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 CGRRF1Q99675 332 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 ACBD6Q9BR61 282 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 LRRC3Q9BY71 257 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 TBC1D17Q9HA65 648 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 PCDHB5Q9Y5E4 795 aa23.72■■□□□ 1.39
C2CD3-216ENST00000541922 NRG2O14511 850 aaPredicted RBP23.71■■□□□ 1.39
C2CD3-216ENST00000541922 GALR2O43603 387 aaPredicted RBP23.71■■□□□ 1.39
C2CD3-216ENST00000541922 LHX1P48742 406 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 NUCB2P80303 420 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 PFKPQ01813 784 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 NFE2Q16621 373 aaPredicted RBP23.71■■□□□ 1.39
C2CD3-216ENST00000541922 ADGRF2Q8IZF7 708 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 SMARCD2Q92925 531 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 ZSWIM3Q96MP5 696 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 ASB16Q96NS5 453 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 PLA2G2FQ9BZM2 168 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 GPR88Q9GZN0 384 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 SLITRK6Q9H5Y7 841 aa23.71■■□□□ 1.39
C2CD3-216ENST00000541922 A0A1W2PRU2 124 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 PI15O43692 258 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 FGF19O95750 216 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 PRR29P0C7W0 189 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 HAPLN1P10915 354 aaPredicted RBP23.7■■□□□ 1.38
C2CD3-216ENST00000541922 ACAT1P24752 427 aaKnown RBP23.7■■□□□ 1.38
C2CD3-216ENST00000541922 SOWAHAQ2M3V2 549 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 KRBA2Q6ZNG9 492 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 DPH6Q7L8W6 267 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 SHDQ96IW2 340 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 LPIN3Q9BQK8 851 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 IRF2BPLQ9H1B7 796 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 GOLPH3LQ9H4A5 285 aa23.7■■□□□ 1.38
C2CD3-216ENST00000541922 ZNF202O95125 648 aa23.69■■□□□ 1.38
C2CD3-216ENST00000541922 ATF6P18850 670 aa23.69■■□□□ 1.38
C2CD3-216ENST00000541922 FCARP24071 287 aa23.69■■□□□ 1.38
C2CD3-216ENST00000541922 PCSK1P29120 753 aa23.69■■□□□ 1.38
C2CD3-216ENST00000541922 TAF12Q16514 161 aa23.69■■□□□ 1.38
C2CD3-216ENST00000541922 INTS6LQ5JSJ4 861 aaKnown RBP23.69■■□□□ 1.38
C2CD3-216ENST00000541922 PHLDB3Q6NSJ2 640 aa23.69■■□□□ 1.38
C2CD3-216ENST00000541922 OSTM1Q86WC4 334 aa23.69■■□□□ 1.38
C2CD3-216ENST00000541922 ZSCAN18Q8TBC5 510 aaPredicted RBP23.69■■□□□ 1.38
C2CD3-216ENST00000541922 ZNF334Q9HCZ1 680 aaPredicted RBP23.69■■□□□ 1.38
C2CD3-216ENST00000541922 TMLHEQ9NVH6 421 aa23.69■■□□□ 1.38
C2CD3-216ENST00000541922 GABRDO14764 452 aa23.68■■□□□ 1.38
C2CD3-216ENST00000541922 GABRR2P28476 465 aa23.68■■□□□ 1.38
C2CD3-216ENST00000541922 DPYDQ12882 1025 aa23.68■■□□□ 1.38
C2CD3-216ENST00000541922 SNW1Q13573 536 aaKnown RBP23.68■■□□□ 1.38
C2CD3-216ENST00000541922 SLC44A4Q53GD3 710 aa23.68■■□□□ 1.38
C2CD3-216ENST00000541922 GIPC2Q8TF65 315 aa23.68■■□□□ 1.38
C2CD3-216ENST00000541922 CCDC34Q96HJ3 373 aa23.68■■□□□ 1.38
C2CD3-216ENST00000541922 PI4K2AQ9BTU6 479 aa23.68■■□□□ 1.38
C2CD3-216ENST00000541922 KCTD10Q9H3F6 313 aa23.68■■□□□ 1.38
C2CD3-216ENST00000541922 ATXN3LQ9H3M9 355 aa23.68■■□□□ 1.38
C2CD3-216ENST00000541922 PDXKO00764 312 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 RHOBTB3O94955 611 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 KIF20AO95235 890 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 CST3P01034 146 aaPredicted RBP23.67■■□□□ 1.38
C2CD3-216ENST00000541922 STARD6P59095 220 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 TRPC3Q13507 836 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 MLF2Q15773 248 aaPredicted RBP23.67■■□□□ 1.38
C2CD3-216ENST00000541922 GAREM2Q75VX8 874 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 SLC9A9Q8IVB4 645 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 MMS19Q96T76 1030 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 DMAC2Q9NW81 257 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 GTF3C4Q9UKN8 822 aa23.67■■□□□ 1.38
C2CD3-216ENST00000541922 GOLGA6L4A6NEF3 574 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 H0Y858 1186 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 NR3C1P04150 777 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 HOXD11P31277 338 aaPredicted RBP23.66■■□□□ 1.38
C2CD3-216ENST00000541922 PRKCQQ04759 706 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 GRM2Q14416 872 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 ARHGAP15Q53QZ3 475 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 LIMS2Q7Z4I7 341 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 TMEM174Q8WUU8 243 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 ZNF516Q92618 1163 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 GCNAQ96QF7 691 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 PKMYT1Q99640 499 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 TRMT61BQ9BVS5 477 aaKnown RBP23.66■■□□□ 1.38
C2CD3-216ENST00000541922 GZF1Q9H116 711 aaPredicted RBP23.66■■□□□ 1.38
C2CD3-216ENST00000541922 BRD9Q9H8M2 597 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 TRPV4Q9HBA0 871 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 ABCB6Q9NP58 842 aa23.66■■□□□ 1.38
C2CD3-216ENST00000541922 HCRTO43612 131 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms