RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 CBX6O95503 412 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 KRT16P08779 473 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 ALDH5A1P51649 535 aaPredicted RBP14.28□□□□□ -0.12
PTPN1-202ENST00000541713 DRG2P55039 364 aaKnown RBP14.28□□□□□ -0.12
PTPN1-202ENST00000541713 BPIFB4P59827 614 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 TRMT10CQ7L0Y3 403 aaKnown RBP14.28□□□□□ -0.12
PTPN1-202ENST00000541713 PALM2Q8IXS6 379 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 C12orf29Q8N999 325 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 GPRASP2Q96D09 838 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 CLMNQ96JQ2 1002 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 BTBD7Q9P203 1132 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 NRXN2Q9P2S2 1712 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 DOCK5Q9H7D0 1870 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 ARIH2O95376 493 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 PRKCBP05771 671 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 KRT3P12035 628 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 ZNF252P-AS1Q0IIN9 211 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 PSMD6Q15008 389 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 MSS51Q4VC12 460 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 EIF1ADQ8N9N8 165 aaKnown RBP14.28□□□□□ -0.12
PTPN1-202ENST00000541713 PYROXD1Q8WU10 500 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 SMYD3Q9H7B4 428 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 CHUKO15111 745 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 RASSF9O75901 435 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 FAM155BO75949 473 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 LYPLA2O95372 231 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 VTNP04004 478 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 KITP10721 976 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 GARTP22102 1010 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 IL1R2P27930 398 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 WDR4P57081 412 aaKnown RBP14.28□□□□□ -0.12
PTPN1-202ENST00000541713 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
PTPN1-202ENST00000541713 GLRA4Q5JXX5 417 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 SPOCD1Q6ZMY3 1216 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 C3orf62Q6ZUJ4 267 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 TTC17Q96AE7 1141 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 MINDY3Q9H8M7 445 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPN1-202ENST00000541713 WHRNQ9P202 907 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 MARCOQ9UEW3 520 aaPredicted RBP14.28□□□□□ -0.12
PTPN1-202ENST00000541713 PGAP2Q9UHJ9 254 aa14.28□□□□□ -0.12
PTPN1-202ENST00000541713 ADM5C9JUS6 153 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 H7C0C1 242 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 ITGB3P05106 788 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 ATP5OP48047 213 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 NUMBP49757 651 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 CENPCQ03188 943 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 SLC1A5Q15758 541 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 OR6B2Q6IFH4 312 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 POTEAQ6S8J7 498 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 TWNKQ96RR1 684 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 CEP41Q9BYV8 373 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 PORCNQ9H237 461 aa14.27□□□□□ -0.12
PTPN1-202ENST00000541713 BHMG1C9JSJ3 638 aaPredicted RBP14.27□□□□□ -0.13
PTPN1-202ENST00000541713 HCRTO43612 131 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 ITGBL1O95965 494 aaPredicted RBP14.27□□□□□ -0.13
PTPN1-202ENST00000541713 CPA2P48052 419 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 CTCFP49711 727 aaPredicted RBP14.27□□□□□ -0.13
PTPN1-202ENST00000541713 PTK6Q13882 451 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 MAPK6Q16659 721 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 DCAF15Q66K64 600 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 PPP1R21Q6ZMI0 780 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 NIPA1Q7RTP0 329 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 UNC45BQ8IWX7 931 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 TMEM35BQ8NCS4 154 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 PIWIL1Q96J94 861 aaKnown RBP14.27□□□□□ -0.13
PTPN1-202ENST00000541713 SLITRK1Q96PX8 696 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 SMC6Q96SB8 1091 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 ACTR5Q9H9F9 607 aaPredicted RBP14.27□□□□□ -0.13
PTPN1-202ENST00000541713 KIAA1586Q9HCI6 787 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 M0QYV0 167 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 ADRA1DP25100 572 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 LAMTOR4Q0VGL1 99 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 PTPN20Q4JDL3 420 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 FAM102AQ5T9C2 384 aaPredicted RBP14.27□□□□□ -0.13
PTPN1-202ENST00000541713 KIAA0319LQ8IZA0 1049 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 FBXL18Q96ME1 805 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 SLC13A1Q9BZW2 595 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 AS3MTQ9HBK9 375 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 NRBP2Q9NSY0 501 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 AKT3Q9Y243 479 aa14.27□□□□□ -0.13
PTPN1-202ENST00000541713 LAMA2P24043 3122 aaKnown RBP14.26□□□□□ -0.13
PTPN1-202ENST00000541713 LIASO43766 372 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 DIAPH2O60879 1101 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 CDH16O75309 829 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 TJP3O95049 919 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 NFICP08651 508 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 CYP1B1Q16678 543 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 FNBP1LQ5T0N5 605 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 LVRNQ6Q4G3 990 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 SPATA33Q96N06 139 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 PCYT2Q99447 389 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 CYTH4Q9UIA0 394 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 HES2Q9Y543 173 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 FOCADQ5VW36 1801 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 A0A0B4J269 797 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 SPATA31C2B4DYI2 1134 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 EZRP15311 586 aaKnown RBP14.26□□□□□ -0.13
PTPN1-202ENST00000541713 DUOXA2Q1HG44 320 aa14.26□□□□□ -0.13
PTPN1-202ENST00000541713 ZNF772Q68DY9 489 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms