RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ALFQ53S48 1182 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 CCDC70Q6NSX1 233 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 ZNF529Q6P280 563 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 KRT78Q8N1N4 520 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 CCDC33Q8N5R6 958 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 OR2C3Q8N628 320 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 CPEB3Q8NE35 698 aaKnown RBP5.04□□□□□ -1.6
SNHG1-217ENST00000541578 OR56A1Q8NGH5 318 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 CCHCR1Q8TD31 782 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 AGAP2Q99490 1192 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 NEU1Q99519 415 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 CRB3Q9BUF7 120 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-217ENST00000541578 WDR11Q9BZH6 1224 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 SARS2Q9NP81 518 aaKnown RBP5.04□□□□□ -1.6
SNHG1-217ENST00000541578 LMBRD1Q9NUN5 540 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 DKK2Q9UBU2 259 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 FEZ2Q9UHY8 353 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-217ENST00000541578 PCDHA13Q9Y5I0 950 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 ACTL7AQ9Y615 435 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 PRG4Q92954 1404 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-217ENST00000541578 TOP2BQ02880 1626 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 SHROOM2Q13796 1616 aa5.04□□□□□ -1.6
SNHG1-217ENST00000541578 COL4A3Q01955 1670 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 PHGDHO43175 533 aaKnown RBP5.03□□□□□ -1.6
SNHG1-217ENST00000541578 AMY1AP04745 511 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 DDCP20711 480 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 FPR1P21462 350 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 TNFSF4P23510 183 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 PCSK1P29120 753 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 ZEB1P37275 1124 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-217ENST00000541578 TM4SF4P48230 202 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 MAP2K6P52564 334 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 MAPK10P53779 464 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 RAB1AP62820 205 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 SMN1Q16637 294 aaKnown RBP5.03□□□□□ -1.6
SNHG1-217ENST00000541578 SPDYE7PQ495Y7 208 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 ARMC6Q6NXE6 501 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 PCSK4Q6UW60 755 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 SEM1Q6ZVN7 128 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 LCORLQ8N3X6 602 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 SH2D3CQ8N5H7 860 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 FAM167AQ96KS9 214 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 MYOCQ99972 504 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 BTBD1Q9H0C5 482 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 LUZP4Q9P127 313 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-217ENST00000541578 SLC23A1Q9UHI7 598 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 PACSIN3Q9UKS6 424 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 MAP3K2Q9Y2U5 619 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 FHAD1B1AJZ9 1412 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 NUP160Q12769 1436 aa5.03□□□□□ -1.6
SNHG1-217ENST00000541578 ABCA10Q8WWZ4 1543 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 MYBBP1AQ9BQG0 1328 aaKnown RBP5.02□□□□□ -1.61
SNHG1-217ENST00000541578 LMTK3Q96Q04 1460 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 CFIP05156 583 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 ALAS1P13196 640 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 MYF5P13349 255 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 BRAFP15056 766 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 EDNRBP24530 442 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 SLC7A1P30825 629 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 PIK3CBP42338 1070 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 TECP42680 631 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 STT3AP46977 705 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 LMOD3Q0VAK6 560 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 NOGQ13253 232 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 MTM1Q13496 603 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 STARD3Q14849 445 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 ELF2Q15723 593 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 PRR16Q569H4 304 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 UBE3BQ7Z3V4 1068 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 MAPKAPK5Q8IW41 473 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 ZGPATQ8N5A5 531 aaKnown RBP5.02□□□□□ -1.61
SNHG1-217ENST00000541578 PHKBQ93100 1093 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 SLC35A4Q96G79 324 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 APIPQ96GX9 242 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 CLPTM1LQ96KA5 538 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 LRFN3Q9BTN0 628 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 MAF1Q9H063 256 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 RSAD1Q9HA92 442 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 STARD7Q9NQZ5 370 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 RNF181Q9P0P0 153 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 STAP2Q9UGK3 403 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.02□□□□□ -1.61
SNHG1-217ENST00000541578 CPA4Q9UI42 421 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 PADI4Q9UM07 663 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 RUVBL1Q9Y265 456 aaKnown RBP5.02□□□□□ -1.61
SNHG1-217ENST00000541578 DIP2BQ9P265 1576 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 HECW2Q9P2P5 1572 aa5.02□□□□□ -1.61
SNHG1-217ENST00000541578 ADGRL1O94910 1474 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 WRNQ14191 1432 aaPredicted RBP eCLIP5.01□□□□□ -1.61
SNHG1-217ENST00000541578 A0A088AWK7 358 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 A0A1B0GTW7 788 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 GRID2IPA4D2P6 1211 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 POM121BA6NF01 834 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 UNC119BA6NIH7 251 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 MARCH11A6NNE9 402 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 SGTAO43765 313 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 ABCB4P21439 1286 aa5.01□□□□□ -1.61
SNHG1-217ENST00000541578 SLC6A2P23975 617 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms