RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 CNPY4Q8N129 248 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 RSAD2Q8WXG1 361 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 SENP7Q9BQF6 1050 aa15.85■□□□□ 0.13
VARS2-211ENST00000541562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.85■□□□□ 0.13
VARS2-211ENST00000541562 FOCADQ5VW36 1801 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 A0A0G2JND7 137 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 STAM2O75886 525 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 TOP3BO95985 862 aaKnown RBP15.84■□□□□ 0.13
VARS2-211ENST00000541562 PPP2R5DQ14738 602 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 SPATA33Q96N06 139 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 DIS3Q9Y2L1 958 aaKnown RBP15.84■□□□□ 0.13
VARS2-211ENST00000541562 NUDT17P0C025 328 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 CYP2C8P10632 490 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 KRT4P19013 534 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 LAMTOR4Q0VGL1 99 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 VGLL4Q14135 290 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 OR6B2Q6IFH4 312 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 UNC45BQ8IWX7 931 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 TTC17Q96AE7 1141 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 ERP27Q96DN0 273 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 TRAIPQ9BWF2 469 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 LRRC19Q9H756 370 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 ZNF395Q9H8N7 513 aaPredicted RBP15.84■□□□□ 0.13
VARS2-211ENST00000541562 CNOT10Q9H9A5 744 aaKnown RBP15.84■□□□□ 0.13
VARS2-211ENST00000541562 ETNK1Q9HBU6 452 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 M0QYV0 167 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 KRT16P08779 473 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 KRT3P12035 628 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 ANXA13P27216 316 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 SLC1A5Q15758 541 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 HACE1Q8IYU2 909 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 CPXM1Q96SM3 734 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 SLC13A1Q9BZW2 595 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 TRABDQ9H4I3 376 aa15.84■□□□□ 0.13
VARS2-211ENST00000541562 H7C0C1 242 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 P4HA2O15460 535 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 FSBPO95073 299 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 PDGFRBP09619 1106 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 ITIH2P19823 946 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 GBP2P32456 591 aaPredicted RBP15.83■□□□□ 0.12
VARS2-211ENST00000541562 ATP5OP48047 213 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 WDR4P57081 412 aaKnown RBP15.83■□□□□ 0.12
VARS2-211ENST00000541562 NAA25Q14CX7 972 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 NFIL3Q16649 462 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 PTPN20Q4JDL3 420 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 FNBP1LQ5T0N5 605 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 FAM102AQ5T9C2 384 aaPredicted RBP15.83■□□□□ 0.12
VARS2-211ENST00000541562 ZNF772Q68DY9 489 aaPredicted RBP15.83■□□□□ 0.12
VARS2-211ENST00000541562 SPNS2Q8IVW8 549 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 SAMD3Q8N6K7 520 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 B3GNT5Q9BYG0 378 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 TBC1D12O60347 775 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 IQCF3P0C7M6 154 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 CTCFP49711 727 aaPredicted RBP15.83■□□□□ 0.12
VARS2-211ENST00000541562 CRADDP78560 199 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 HHATQ5VTY9 493 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 C3orf62Q6ZUJ4 267 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 SPATA21Q7Z572 469 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 PALM2Q8IXS6 379 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 WDTC1Q8N5D0 677 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 TMC2Q8TDI7 906 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 PGM2Q96G03 612 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 RNPEPQ9H4A4 650 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 TXNRD2Q9NNW7 524 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 LTBP1Q14766 1721 aa15.83■□□□□ 0.12
VARS2-211ENST00000541562 SOWAHBA6NEL2 793 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 SLC26A4O43511 780 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 RFX1P22670 979 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 ALDH5A1P51649 535 aaPredicted RBP15.82■□□□□ 0.12
VARS2-211ENST00000541562 EFCAB12Q6NXP0 572 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 GIMAP7Q8NHV1 300 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 N4BP2L2Q92802 583 aaPredicted RBP15.82■□□□□ 0.12
VARS2-211ENST00000541562 PORCNQ9H237 461 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 PARVAQ9NVD7 372 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 GRID1Q9ULK0 1009 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 USP15Q9Y4E8 981 aaPredicted RBP15.82■□□□□ 0.12
VARS2-211ENST00000541562 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.82■□□□□ 0.12
VARS2-211ENST00000541562 SNX3O60493 162 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 ADRA1DP25100 572 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 HOXA7P31268 230 aaPredicted RBP15.82■□□□□ 0.12
VARS2-211ENST00000541562 MAP2K2P36507 400 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 ELF3P78545 371 aaPredicted RBP15.82■□□□□ 0.12
VARS2-211ENST00000541562 GCNT1Q02742 428 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 BMPR2Q13873 1038 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 PSMD6Q15008 389 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 MAPK6Q16659 721 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 SPOCD1Q6ZMY3 1216 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 PYROXD1Q8WU10 500 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 GPRASP2Q96D09 838 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 ATXN7L3BQ96GX2 97 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 SLITRK1Q96PX8 696 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 KLK14Q9P0G3 267 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 SLC17A6Q9P2U8 582 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 COQ4Q9Y3A0 265 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 ZNFX1Q9P2E3 1918 aaKnown RBP15.82■□□□□ 0.12
VARS2-211ENST00000541562 CETN2P41208 172 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 DCAF15Q66K64 600 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 NOD2Q9HC29 1040 aa15.82■□□□□ 0.12
VARS2-211ENST00000541562 MRPL47Q9HD33 250 aaKnown RBP15.82■□□□□ 0.12
VARS2-211ENST00000541562 MAD1L1Q9Y6D9 718 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms