RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 E7ENX8 843 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 PPM1DO15297 605 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 HDCP19113 662 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 CD6P30203 668 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 TOB1P50616 345 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-210ENST00000541488 TAP2Q03519 686 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 KIF22Q14807 665 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 TBCCQ15814 346 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 NBPF8Q3BBV2 869 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 FAM153CQ494X1 144 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 GRAMD1CQ8IYS0 662 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 ZCRB1Q8TBF4 217 aaKnown RBP5.04□□□□□ -1.6
PRKDC-210ENST00000541488 FKBP10Q96AY3 582 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 AMBRA1Q9C0C7 1298 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 WDCPQ9H6R7 721 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 GPR35Q9HC97 309 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-210ENST00000541488 KLC4Q9NSK0 619 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 RLIMQ9NVW2 624 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 ADAM21Q9UKJ8 722 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 PCDHA6Q9UN73 950 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 ENTPD2Q9Y5L3 495 aa5.04□□□□□ -1.6
PRKDC-210ENST00000541488 URI1O94763 535 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-210ENST00000541488 TTLL1O95922 423 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 PF4V1P10720 104 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 TYRP14679 529 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 CTGFP29279 349 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 ABCG1P45844 678 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 NXPH1P58417 271 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 THEMIS2Q5TEJ8 643 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 TMEM108Q6UXF1 575 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 PRR18Q8N4B5 295 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 CHMP4CQ96CF2 233 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 HOOK2Q96ED9 719 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 SLC46A1Q96NT5 459 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 BRIP1Q9BX63 1249 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 SERHLQ9NQF3 203 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 PNPOQ9NVS9 261 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 STAP2Q9UGK3 403 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 SPEF1Q9Y4P9 236 aa5.03□□□□□ -1.6
PRKDC-210ENST00000541488 WDR27A2RRH5 827 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 ANKRD62A6NC57 917 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 ARIH2O95376 493 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 CHEK2O96017 543 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 CT47B1P0C2W7 299 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-210ENST00000541488 FTH1P19P0C7X4 201 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 GCLCP48506 637 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-210ENST00000541488 KCNJ5P48544 419 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 NEK2P51955 445 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 ZNF134P52741 427 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 SP2Q02086 613 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 SRSF4Q08170 494 aaKnown RBP5.02□□□□□ -1.61
PRKDC-210ENST00000541488 ZNF267Q14586 743 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-210ENST00000541488 PLS1Q14651 629 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.02□□□□□ -1.61
PRKDC-210ENST00000541488 RFKQ969G6 155 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 SARAFQ96BY9 339 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 FAM136AQ96C01 138 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 MVB12AQ96EY5 273 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 SLC35A4Q96G79 324 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 PBKQ96KB5 322 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 KMT5AQ9NQR1 393 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 CPA4Q9UI42 421 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 WNT6Q9Y6F9 365 aa5.02□□□□□ -1.61
PRKDC-210ENST00000541488 KAT6AQ92794 2004 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 SLC16A6O15403 523 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 ALDH2P05091 517 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 ZFXP17010 805 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-210ENST00000541488 IBSPP21815 317 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-210ENST00000541488 CCT8P50990 548 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 CLCN2P51788 898 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 SOX8P57073 446 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 TMEM240Q5SV17 173 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 KLHDC4Q8TBB5 520 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 BRIX1Q8TDN6 353 aaKnown RBP5.01□□□□□ -1.61
PRKDC-210ENST00000541488 LRGUKQ96M69 825 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 TIMP4Q99727 224 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 KRTAP1-5Q9BYS1 174 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 SIK2Q9H0K1 926 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 EHD3Q9NZN3 535 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 SERTAD3Q9UJW9 196 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 ZDHHC8Q9ULC8 765 aa5.01□□□□□ -1.61
PRKDC-210ENST00000541488 SPATA31A3Q5VYP0 1347 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 UNC5CO95185 931 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 HNRNPCP07910 306 aaKnown RBP eCLIP5□□□□□ -1.61
PRKDC-210ENST00000541488 MYBP10242 640 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 ITPKBP27987 946 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 LILRA4P59901 499 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 NHLH1Q02575 133 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 KHDC1LQ5JSQ8 128 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 IFIT1BQ5T764 474 aaKnown RBP5□□□□□ -1.61
PRKDC-210ENST00000541488 PPP1R32Q7Z5V6 425 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 OSBPL9Q96SU4 736 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 MAP3K14Q99558 947 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 CGRRF1Q99675 332 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 RNF7Q9UBF6 113 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 PADI4Q9UM07 663 aa5□□□□□ -1.61
PRKDC-210ENST00000541488 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5□□□□□ -1.61
PRKDC-210ENST00000541488 DCLK1O15075 740 aa4.99□□□□□ -1.61
PRKDC-210ENST00000541488 PROP1O75360 226 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms