RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 L1TD1Q5T7N2 865 aaKnown RBP15.24■□□□□ 0.03
SNHG1-213ENST00000540725 FAM173BQ6P4H8 233 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 C1orf228Q6PIY5 440 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 SV2BQ7L1I2 683 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 LRRTM3Q86VH5 581 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 NT5DC4Q86YG4 428 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 C2orf15Q8WU43 125 aaKnown RBP15.24■□□□□ 0.03
SNHG1-213ENST00000540725 ZFYVE19Q96K21 471 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 ZNF560Q96MR9 790 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 GCNAQ96QF7 691 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 ACCSQ96QU6 501 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 FAM213AQ9BRX8 229 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 TASP1Q9H6P5 420 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 IL21Q9HBE4 155 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 OBP2AQ9NY56 170 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 ABI2Q9NYB9 513 aaPredicted RBP15.24■□□□□ 0.03
SNHG1-213ENST00000540725 TBC1D7Q9P0N9 293 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 EXOC7Q9UPT5 735 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 GCNT3O95395 438 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 HAPLN1P10915 354 aaPredicted RBP15.24■□□□□ 0.03
SNHG1-213ENST00000540725 SYT1P21579 422 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 WEE1P30291 646 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 CTHP32929 405 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 WNT7BP56706 349 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 SATB1Q01826 763 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 CEBPZQ03701 1054 aaKnown RBP15.24■□□□□ 0.03
SNHG1-213ENST00000540725 LRRC32Q14392 662 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 GAS6Q14393 721 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 PUM1Q14671 1186 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNHG1-213ENST00000540725 TAF12Q16514 161 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 TXNDC11Q6PKC3 985 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 DGLUCYQ7Z3D6 616 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 BRSK2Q8IWQ3 736 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 DCP1BQ8IZD4 617 aaKnown RBP15.24■□□□□ 0.03
SNHG1-213ENST00000540725 ZSWIM2Q8NEG5 633 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 GIPC2Q8TF65 315 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 SECISBP2LQ93073 1101 aaKnown RBP15.24■□□□□ 0.03
SNHG1-213ENST00000540725 SAAL1Q96ER3 474 aa15.24■□□□□ 0.03
SNHG1-213ENST00000540725 ANAPC1Q9H1A4 1944 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 CNOT1A5YKK6 2376 aaKnown RBP15.23■□□□□ 0.03
SNHG1-213ENST00000540725 MYBPHLA2RUH7 354 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 SPECC1L-ADORA2AF8WAN1 911 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 TULP1O00294 542 aaPredicted RBP15.23■□□□□ 0.03
SNHG1-213ENST00000540725 IDEP14735 1019 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 PNPLA4P41247 253 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 CXCL12P48061 93 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 CASP5P51878 434 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 TFAMQ00059 246 aaKnown RBP15.23■□□□□ 0.03
SNHG1-213ENST00000540725 CCDC73Q6ZRK6 1079 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 RALGPS2Q86X27 583 aaPredicted RBP15.23■□□□□ 0.03
SNHG1-213ENST00000540725 SPEM1Q8N4L4 309 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 GPR161Q8N6U8 529 aaKnown RBP15.23■□□□□ 0.03
SNHG1-213ENST00000540725 TTC8Q8TAM2 541 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 BPIFB1Q8TDL5 484 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 OLFML3Q9NRN5 406 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 RBM12Q9NTZ6 932 aaKnown RBP15.23■□□□□ 0.03
SNHG1-213ENST00000540725 DLL3Q9NYJ7 618 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 GTSE1Q9NYZ3 720 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 PCDHB5Q9Y5E4 795 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 PCDHB13Q9Y5F0 798 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 GREB1Q4ZG55 1949 aa15.23■□□□□ 0.03
SNHG1-213ENST00000540725 LDHAP00338 332 aaKnown RBP15.22■□□□□ 0.03
SNHG1-213ENST00000540725 ITGB3P05106 788 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 GARTP22102 1010 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 POLR2BP30876 1174 aaKnown RBP15.22■□□□□ 0.03
SNHG1-213ENST00000540725 STAT6P42226 847 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 PLCB2Q00722 1185 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 TSPY1Q01534 308 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 RSPO4Q2I0M5 234 aaPredicted RBP15.22■□□□□ 0.03
SNHG1-213ENST00000540725 WDR44Q5JSH3 913 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 Q6ZS52 159 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 SYCP3Q8IZU3 236 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 C1orf127Q8N9H9 656 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 SLC46A2Q9BY10 475 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 SMG9Q9H0W8 520 aaKnown RBP15.22■□□□□ 0.03
SNHG1-213ENST00000540725 TMLHEQ9NVH6 421 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 RBAKQ9NYW8 714 aaPredicted RBP15.22■□□□□ 0.03
SNHG1-213ENST00000540725 GMEB2Q9UKD1 530 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 AGAP1Q9UPQ3 857 aa15.22■□□□□ 0.03
SNHG1-213ENST00000540725 A0A087X0B3 334 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 MED19A0JLT2 244 aaPredicted RBP15.21■□□□□ 0.02
SNHG1-213ENST00000540725 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 GOLGA8IPA6NC78 632 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 GOLGA8JA6NMD2 632 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 HMGA1P17096 107 aaKnown RBP15.21■□□□□ 0.02
SNHG1-213ENST00000540725 TNK2Q07912 1038 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 ALCAMQ13740 583 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 PON2Q15165 354 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 NFE2Q16621 373 aaPredicted RBP15.21■□□□□ 0.02
SNHG1-213ENST00000540725 DGKKQ5KSL6 1271 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 CMTM8Q8IZV2 173 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 PDCL2Q8N4E4 241 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 CELF5Q8N6W0 485 aaKnown RBP15.21■□□□□ 0.02
SNHG1-213ENST00000540725 CACTINQ8WUQ7 758 aaKnown RBP15.21■□□□□ 0.02
SNHG1-213ENST00000540725 FAM84AQ96KN4 292 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 USP28Q96RU2 1077 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 CBWD1Q9BRT8 395 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 PI4K2AQ9BTU6 479 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 FGFBP2Q9BYJ0 223 aa15.21■□□□□ 0.02
SNHG1-213ENST00000540725 PANK2Q9BZ23 570 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms