RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CACNA2D4Q7Z3S7 1137 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 TMC7Q7Z402 723 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 CCAR2Q8N163 923 aaKnown RBP11.35□□□□□ -0.59
ATL3-204ENST00000540699 PIK3R5Q8WYR1 880 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 SEMA4DQ92854 862 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 KHSRPQ92945 711 aaKnown RBP eCLIP11.35□□□□□ -0.59
ATL3-204ENST00000540699 GPR88Q9GZN0 384 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 NUCKS1Q9H1E3 243 aaKnown RBP11.35□□□□□ -0.59
ATL3-204ENST00000540699 RXFP1Q9HBX9 757 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 ENTPD7Q9NQZ7 604 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 AIPL1Q9NZN9 384 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 APEX2Q9UBZ4 518 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 SSX2IPQ9Y2D8 614 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 PCDHGC5Q9Y5F6 944 aa11.35□□□□□ -0.59
ATL3-204ENST00000540699 WDFY4Q6ZS81 3184 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 USP27XA6NNY8 438 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 HIDE1A8MVS5 230 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 I3L4J1 428 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 TBC1D4O60343 1298 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 VNN1O95497 513 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 CXCL14O95715 111 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 STAU1O95793 577 aaKnown RBP11.34□□□□□ -0.59
ATL3-204ENST00000540699 C1RP00736 705 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 CYP11A1P05108 521 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 URODP06132 367 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 KCNA5P22460 613 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 POLR2BP30876 1174 aaKnown RBP11.34□□□□□ -0.59
ATL3-204ENST00000540699 TAF6P49848 677 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 RBP5P82980 135 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 CETN1Q12798 172 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 KCNC3Q14003 757 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 MRPL58Q14197 206 aaKnown RBP11.34□□□□□ -0.59
ATL3-204ENST00000540699 BMS1Q14692 1282 aaKnown RBP11.34□□□□□ -0.59
ATL3-204ENST00000540699 DUSP6Q16828 381 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 TCEAL5Q5H9L2 206 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 TDRD10Q5VZ19 366 aaKnown RBP11.34□□□□□ -0.59
ATL3-204ENST00000540699 PLPP4Q5VZY2 271 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 HGSNATQ68CP4 663 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 PHLDB3Q6NSJ2 640 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 TOGARAM2Q6ZUX3 1019 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 LIMS2Q7Z4I7 341 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 ADGRD2Q7Z7M1 963 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 FBXL13Q8NEE6 735 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 LNX1Q8TBB1 728 aaPredicted RBP11.34□□□□□ -0.59
ATL3-204ENST00000540699 TAS1R2Q8TE23 839 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 PPP2R3CQ969Q6 453 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 ZNF560Q96MR9 790 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 CDCA3Q99618 268 aaPredicted RBP11.34□□□□□ -0.59
ATL3-204ENST00000540699 TTPALQ9BTX7 342 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 VRTNQ9H8Y1 702 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 CD320Q9NPF0 282 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.34□□□□□ -0.59
ATL3-204ENST00000540699 MRPL17Q9NRX2 175 aaKnown RBP11.34□□□□□ -0.59
ATL3-204ENST00000540699 GDAP2Q9NXN4 497 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 FNIP2Q9P278 1114 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 ARHGAP20Q9P2F6 1191 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 AGAP1Q9UPQ3 857 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 NUB1Q9Y5A7 615 aa11.34□□□□□ -0.59
ATL3-204ENST00000540699 ARHGEF37A1IGU5 675 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 NCK2O43639 380 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 OAZ2O95190 189 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 CST3P01034 146 aaPredicted RBP11.33□□□□□ -0.6
ATL3-204ENST00000540699 CNPP09543 421 aaKnown RBP11.33□□□□□ -0.6
ATL3-204ENST00000540699 TYMPP19971 482 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 TKTP29401 623 aaKnown RBP11.33□□□□□ -0.6
ATL3-204ENST00000540699 CREMQ03060 361 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 HYAL1Q12794 435 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
ATL3-204ENST00000540699 CTC1Q2NKJ3 1217 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 TSR1Q2NL82 804 aaKnown RBP11.33□□□□□ -0.6
ATL3-204ENST00000540699 ASTE1Q2TB18 679 aaPredicted RBP11.33□□□□□ -0.6
ATL3-204ENST00000540699 SV2CQ496J9 727 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 SFMBT2Q5VUG0 894 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 ARHGEF19Q8IW93 802 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 CCDC170Q8IYT3 715 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 EFHBQ8N7U6 833 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.33□□□□□ -0.6
ATL3-204ENST00000540699 AUTS2Q8WXX7 1259 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 B3GALT6Q96L58 329 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 SENP8Q96LD8 212 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 STK33Q9BYT3 514 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 XYLT2Q9H1B5 865 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 C11orf16Q9NQ32 467 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 ZNHIT6Q9NWK9 470 aaKnown RBP11.33□□□□□ -0.6
ATL3-204ENST00000540699 RAB20Q9NX57 234 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 MTRRQ9UBK8 725 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 DNAJC12Q9UKB3 198 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 BACE2Q9Y5Z0 518 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 ADGRG1Q9Y653 693 aa11.33□□□□□ -0.6
ATL3-204ENST00000540699 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.32□□□□□ -0.6
ATL3-204ENST00000540699 SSU72P8A0A1W2PR75 194 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 KPNA7A9QM74 516 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 F8VZ95 297 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 CLASP2O75122 1294 aaKnown RBP11.32□□□□□ -0.6
ATL3-204ENST00000540699 NDUFA10O95299 355 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 HLA-DRAP01903 254 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 SERPING1P05155 500 aa11.32□□□□□ -0.6
ATL3-204ENST00000540699 PLEKP08567 350 aaPredicted RBP11.32□□□□□ -0.6
ATL3-204ENST00000540699 ATICP31939 592 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms